Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03401 and H281DRAFT_03402 are separated by 84 nucleotidesH281DRAFT_03402 and H281DRAFT_03403 are separated by 472 nucleotidesH281DRAFT_03403 and H281DRAFT_03404 are separated by 22 nucleotidesH281DRAFT_03404 and H281DRAFT_03405 are separated by 92 nucleotides H281DRAFT_03401: H281DRAFT_03401 - hypothetical protein, at 471,205 to 471,786 _03401 H281DRAFT_03402: H281DRAFT_03402 - hypothetical protein, at 471,871 to 472,188 _03402 H281DRAFT_03403: H281DRAFT_03403 - Predicted ATPase, at 472,661 to 474,166 _03403 H281DRAFT_03404: H281DRAFT_03404 - Response regulator, at 474,189 to 474,563 _03404 H281DRAFT_03405: H281DRAFT_03405 - catalase, at 474,656 to 476,119 _03405
Group Condition H281DRAFT_03401 H281DRAFT_03402 H281DRAFT_03403 H281DRAFT_03404 H281DRAFT_03405
carbon source butyrate (C) N.D. N.D. -0.3 N.D. -0.3
phage Bu1_10 N.D. N.D. -0.7 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.5 N.D. -0.0
carbon source Phenylacetic (C) N.D. N.D. -0.2 N.D. -0.3
carbon source Malonic (C) N.D. N.D. -0.4 N.D. -0.1
carbon source Protocatechuic Acid (C) N.D. N.D. -0.3 N.D. -0.2
carbon source Dodecandioic (C) N.D. N.D. -0.4 N.D. -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -0.5 N.D. +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.5 N.D. +0.1
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.1 N.D. -0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.3 N.D. +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -0.3 N.D. +0.2
carbon source propionate (C) N.D. N.D. -0.4 N.D. +0.4
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. +0.4 N.D. -0.5
carbon source Sebacic (C) N.D. N.D. -0.3 N.D. +0.3
carbon source Hexanoic (C) N.D. N.D. -0.3 N.D. +0.3
carbon source Valeric (C) N.D. N.D. +0.4 N.D. -0.2
phage Bu1_100 N.D. N.D. +0.4 N.D. -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. +0.4 N.D. -0.3
carbon source Gallic Acid (C) N.D. N.D. +0.4 N.D. -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. +0.5 N.D. -0.1
carbon source D,L-Lactate (C) N.D. N.D. +0.4 N.D. -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. +0.4 N.D. +0.0
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. +0.6 N.D. -0.1
control NoPhageControl N.D. N.D. +0.2 N.D. +0.3
carbon source Malonic (C) N.D. N.D. +0.4 N.D. +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. +0.5 N.D. +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. +0.4 N.D. +0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.7 N.D. +0.1
carbon source D-Glucose (C) N.D. N.D. +0.6 N.D. +0.4
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