Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03362 and H281DRAFT_03363 are separated by 12 nucleotidesH281DRAFT_03363 and H281DRAFT_03364 overlap by 8 nucleotidesH281DRAFT_03364 and H281DRAFT_03365 overlap by 4 nucleotidesH281DRAFT_03365 and H281DRAFT_03366 overlap by 4 nucleotides H281DRAFT_03362: H281DRAFT_03362 - Acyl-CoA dehydrogenase, at 421,632 to 422,813 _03362 H281DRAFT_03363: H281DRAFT_03363 - fumarate reductase (CoM/CoB) subunit A, at 422,826 to 424,604 _03363 H281DRAFT_03364: H281DRAFT_03364 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 424,597 to 425,820 _03364 H281DRAFT_03365: H281DRAFT_03365 - choline dehydrogenase, at 425,817 to 427,457 _03365 H281DRAFT_03366: H281DRAFT_03366 - electron transfer flavoprotein beta subunit, at 427,454 to 428,203 _03366
Group Condition H281DRAFT_03362 H281DRAFT_03363 H281DRAFT_03364 H281DRAFT_03365 H281DRAFT_03366
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.3 -0.3 -0.2 +0.2 N.D.
carbon source Malonic (C) -0.3 -0.3 -0.3 +0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.1 +0.2 -0.4 N.D.
phage Bu1_100 +0.1 +0.5 -0.8 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.3 +0.0 -0.0 -0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 +0.0 -0.6 +0.3 N.D.
carbon source Azelaic (C) -0.2 -0.3 +0.4 -0.1 N.D.
lb LB -0.2 -0.1 +0.3 -0.3 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 +0.2 -0.5 +0.2 N.D.
phage Bu1_10 +0.1 -0.4 +0.5 -0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 +0.2 -0.6 +0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.2 -0.0 -0.6 +0.4 N.D.
carbon source butyrate (C) +0.3 +0.0 -0.5 +0.2 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.3 -0.0 -0.5 +0.3 N.D.
ecofab LB in EcoFAB_3.5mL -0.2 -0.1 -0.2 +0.5 N.D.
carbon source 2-furoic (C) -0.1 -0.3 +0.2 +0.3 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 +0.1 -0.1 +0.5 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 -0.2 +0.1 +0.6 N.D.
carbon source D,L-Lactate (C) -0.2 +0.0 +0.6 +0.1 N.D.
carbon source D-Glucose (C) -0.1 +0.2 +0.6 -0.2 N.D.
carbon source butyrate (C) +0.3 -0.2 +0.2 +0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.0 +0.5 +0.5 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 +0.5 +0.3 -0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 +0.4 +0.7 -0.3 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 -0.2 +0.3 +0.5 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.4 +0.3 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.5 +0.5 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.1 +0.3 +0.5 N.D.
carbon source adipate (C) +1.8 +0.5 +0.8 +1.6 N.D.
carbon source adipate (C) +1.7 +0.9 +1.3 +1.5 N.D.
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