Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03231 and H281DRAFT_03232 are separated by 10 nucleotidesH281DRAFT_03232 and H281DRAFT_03233 are separated by 181 nucleotidesH281DRAFT_03233 and H281DRAFT_03234 are separated by 89 nucleotidesH281DRAFT_03234 and H281DRAFT_03235 are separated by 45 nucleotides H281DRAFT_03231: H281DRAFT_03231 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 284,147 to 285,112 _03231 H281DRAFT_03232: H281DRAFT_03232 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 285,123 to 285,974 _03232 H281DRAFT_03233: H281DRAFT_03233 - cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases, at 286,156 to 287,442 _03233 H281DRAFT_03234: H281DRAFT_03234 - chemotaxis protein MotA, at 287,532 to 288,296 _03234 H281DRAFT_03235: H281DRAFT_03235 - chemotaxis protein MotB, at 288,342 to 289,034 _03235
Group Condition H281DRAFT_03231 H281DRAFT_03232 H281DRAFT_03233 H281DRAFT_03234 H281DRAFT_03235
carbon source Valeric (C) +0.2 -0.4 -0.6 -0.9 +0.0
carbon source D-Glucose (C) -0.0 -0.2 -0.5 -0.4 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.4 +0.3 -0.4 -0.3
carbon source Hexanoic (C) -0.1 -0.5 -0.3 -0.1 +0.3
carbon source Hexanoic (C) +0.1 -0.0 -1.2 +0.4 +0.2
carbon source Valeric (C) +0.3 -0.1 -0.9 +0.4 +0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.1 -0.3 +0.8 -0.3
phage Bu1_100 +0.2 +0.3 -0.1 +0.3 -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 -0.0 +0.2 +0.6 -0.5
carbon source succinate (C) -0.0 -0.3 -0.4 +0.6 +0.4
carbon source Pimelic (C) +0.1 -0.1 +0.0 -0.5 +0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +0.1 -0.3 -0.3 +0.5
carbon source propionate (C) +0.1 +0.1 -0.5 +0.5 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 +0.4 +0.4 +0.1 -0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.3 +0.2 +0.4 +0.6 -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.1 +0.6 +0.3 -0.3 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 +0.5 +0.6 -0.2 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.0 +0.5 +0.5 +0.2 -0.4
carbon source adipate (C) +0.2 +0.3 +0.2 +0.6 -0.4
carbon source Gallic Acid (C) +0.0 +0.4 -0.3 +0.5 +0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 +0.5 +0.3 +0.4 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -0.2 +0.4 +0.0 +0.9 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +0.5 +0.2 +0.5 -0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 +0.4 -0.1 +0.5 +0.3
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 +0.6 -0.1 +0.7 +0.1
phage Bu1_100 +0.3 +0.1 +0.5 +0.4 +0.1
carbon source adipate (C) -0.0 +0.7 +0.0 +0.7 -0.0
carbon source acetate (C) +0.3 -0.1 +0.1 +0.5 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 +0.7 +0.1 +0.1 +0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.0 +0.4 +0.6 +0.5 +0.5
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