Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03141 and H281DRAFT_03142 are separated by 266 nucleotidesH281DRAFT_03142 and H281DRAFT_03143 are separated by 199 nucleotidesH281DRAFT_03143 and H281DRAFT_03144 are separated by 335 nucleotidesH281DRAFT_03144 and H281DRAFT_03145 overlap by 4 nucleotides H281DRAFT_03141: H281DRAFT_03141 - sulfate permease, SulP family, at 178,474 to 179,961 _03141 H281DRAFT_03142: H281DRAFT_03142 - Lipid-binding SYLF domain-containing protein, at 180,228 to 180,818 _03142 H281DRAFT_03143: H281DRAFT_03143 - FAD/FMN-containing dehydrogenase, at 181,018 to 182,406 _03143 H281DRAFT_03144: H281DRAFT_03144 - putative phosphoesterase, at 182,742 to 183,404 _03144 H281DRAFT_03145: H281DRAFT_03145 - ATP-dependent helicase Lhr and Lhr-like helicase, at 183,401 to 186,058 _03145
Group Condition H281DRAFT_03141 H281DRAFT_03142 H281DRAFT_03143 H281DRAFT_03144 H281DRAFT_03145
carbon source 4-Hydroxybenzoic Acid (C) +0.0 +0.4 -1.0 -1.3 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 -0.2 -0.4 -1.0 +0.1
carbon source Protocatechuic Acid (C) +0.0 -0.3 -0.4 -0.9 +0.1
carbon source Hexanoic (C) +0.1 -0.7 +0.0 -0.8 +0.0
carbon source Sebacic (C) +0.4 -1.4 +0.7 -0.5 -0.2
phage Bu1_10 +0.2 -1.9 -0.2 +1.0 -0.0
phage Bu1_100 +0.2 -0.7 -0.7 +0.6 -0.2
carbon source D-Glucose (C) +0.3 +0.0 +0.0 -1.0 +0.0
carbon source Phenylacetic (C) -0.3 +0.4 -0.6 +0.1 -0.1
carbon source adipate (C) -0.1 +0.5 +0.2 -0.5 -0.1
carbon source Valeric (C) +0.3 -0.6 +0.6 -0.1 -0.1
carbon source Protocatechuic Acid (C) -0.1 -0.5 +0.4 +0.1 +0.2
carbon source D-Glucose 20 mM (C) -0.1 +0.5 +0.2 -0.5 -0.1
phage Bu1_100 -0.3 +0.1 -0.3 +0.4 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 -0.6 -0.0 +0.5 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.0 -0.7 -0.3 +0.7 +0.5
carbon source butyrate (C) +0.3 +0.0 +0.3 -0.5 +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 +0.7 -0.5 +0.5 -0.2
carbon source Malonic (C) -0.1 +0.5 +0.5 -0.5 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 +0.4 +0.1 +0.5 -0.3
carbon source Gallic Acid (C) +0.3 +0.7 +0.3 -0.4 -0.1
ecofab LB in EcoFAB_3.5mL -0.1 +0.5 -0.2 +0.6 -0.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.1 +0.7 -0.1 +0.5 -0.1
carbon source adipate (C) +0.3 -0.2 +0.6 +0.6 -0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 +0.7 +0.1 +0.5 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 +0.8 +0.1 +0.4 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.0 +0.7 +0.0 +0.6 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.5 +0.5 +0.3 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 +0.5 +0.4 +0.5 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 +1.1 +0.3 +0.6 -0.1
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