Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_03098	H281DRAFT_03099	H281DRAFT_03100	H281DRAFT_03101	H281DRAFT_03102
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	-2.4	-2.4	+0.5	-0.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	-2.1	-2.0	+0.2	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-2.1	-1.8	+0.1	+0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	-2.8	-1.0	+0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.3	-2.0	-0.5	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.9	-1.9	+0.2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-2.0	-1.3	-0.0	+0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	-1.6	-2.1	+0.9	-0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.4	-1.6	-0.2	+0.4
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.9	-0.4	+0.0	+0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	-2.3	-0.1	+0.4	+0.1
	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.8	-0.4	+0.2	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.1	-0.4	-0.4	+0.1
carbon source	Sebacic (C)	N.D.	-0.4	-0.1	-0.9	-0.4
carbon source	adipate (C)	N.D.	-0.1	-0.0	-1.5	+0.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	N.D.	-0.1	-0.5	-0.5	-0.2
carbon source	Azelaic (C)	N.D.	+0.2	-0.3	-0.8	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-1.2	-0.6	+0.4	+0.3
carbon source	succinate (C)	N.D.	-0.7	+0.3	-0.1	-0.2
carbon source	2-Deoxy-D-Ribose (C)	N.D.	+0.2	-0.0	-0.9	+0.3
phage	Bu1_100	N.D.	-0.5	-0.2	+0.6	-0.3
carbon source	butyrate (C)	N.D.	+0.3	+0.5	-0.5	-0.3
carbon source	Valeric (C)	N.D.	-0.1	+0.1	+0.5	-0.6
carbon source	Valeric (C)	N.D.	+0.7	+0.6	-0.8	-0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	-0.4	+0.8	-0.2	-0.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	-0.3	+0.8	-0.2	+0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	N.D.	+0.4	+0.3	+0.4	-0.2
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	N.D.	-0.1	+0.4	+0.7	+0.2
carbon source	Malonic (C)	N.D.	+0.4	+0.5	+0.2	+0.1
carbon source	2'-Deoxyinosine 10 mM (C)	N.D.	+0.5	+0.9	+0.5	+0.1