Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03065 and H281DRAFT_03066 are separated by 107 nucleotidesH281DRAFT_03066 and H281DRAFT_03067 are separated by 123 nucleotidesH281DRAFT_03067 and H281DRAFT_03068 are separated by 53 nucleotidesH281DRAFT_03068 and H281DRAFT_03069 are separated by 447 nucleotides H281DRAFT_03065: H281DRAFT_03065 - MFS transporter, DHA1 family, multidrug resistance protein, at 96,615 to 97,877 _03065 H281DRAFT_03066: H281DRAFT_03066 - transcriptional regulator, LysR family, at 97,985 to 98,911 _03066 H281DRAFT_03067: H281DRAFT_03067 - peroxiredoxin, Ohr subfamily, at 99,035 to 99,451 _03067 H281DRAFT_03068: H281DRAFT_03068 - hypothetical protein, at 99,505 to 99,732 _03068 H281DRAFT_03069: H281DRAFT_03069 - Uncharacterized conserved protein, at 100,180 to 100,551 _03069
Group Condition H281DRAFT_03065 H281DRAFT_03066 H281DRAFT_03067 H281DRAFT_03068 H281DRAFT_03069
carbon source Valeric (C) +0.0 -0.5 -0.4 N.D. -1.4
carbon source Azelaic (C) -0.7 +0.4 +0.1 N.D. -1.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.0 -0.4 -0.5 N.D. -1.1
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.8 -0.7 N.D. -0.3
carbon source D-Galactose (C) -0.1 -0.3 -0.7 N.D. -0.9
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.8 -0.0 -1.0 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.3 -0.3 N.D. -0.9
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.0 +0.3 -0.3 N.D. -1.4
carbon source Protocatechuic Acid (C) +0.4 -0.1 -0.8 N.D. -0.6
carbon source adipate (C) -0.1 -0.6 +0.3 N.D. -0.7
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.2 -0.6 +0.3 N.D. -0.7
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 +0.4 -0.8 N.D. -0.3
carbon source Malonic (C) +0.3 +0.2 -0.6 N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 +0.3 -1.0 N.D. +0.5
carbon source Gallic Acid (C) -0.1 +0.7 -0.7 N.D. -0.6
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 -0.9 -0.2 N.D. +0.6
carbon source butyrate (C) -0.0 -0.7 -0.6 N.D. +1.1
carbon source Sebacic (C) -0.1 -0.3 -0.7 N.D. +1.0
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 +0.2 -0.7 N.D. +0.7
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.2 +0.6 -0.6 N.D. +0.3
ecofab LB in EcoFAB_3.5mL -0.3 +0.4 -1.0 N.D. +1.0
carbon source Dodecandioic (C) -0.2 -0.3 -0.3 N.D. +1.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.2 +0.1 -0.5 N.D. +1.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.6 +0.7 -0.4 N.D. +1.0
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 +0.4 -0.6 N.D. +0.6
carbon source D-Glucose (C) +0.4 +0.7 +0.5 N.D. -0.2
carbon source Hexanoic (C) +0.2 +1.0 -0.3 N.D. +0.7
lb LB +0.4 +0.5 -0.3 N.D. +1.2
carbon source D,L-Lactate (C) +0.4 -0.0 +0.3 N.D. +1.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 +0.5 +0.4 N.D. +1.4
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