Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03059 and H281DRAFT_03060 are separated by 14 nucleotidesH281DRAFT_03060 and H281DRAFT_03061 are separated by 303 nucleotidesH281DRAFT_03061 and H281DRAFT_03062 are separated by 186 nucleotidesH281DRAFT_03062 and H281DRAFT_03063 are separated by 171 nucleotides H281DRAFT_03059: H281DRAFT_03059 - two-component system, chemotaxis family, CheB/CheR fusion protein, at 90,523 to 93,663 _03059 H281DRAFT_03060: H281DRAFT_03060 - putative addiction module antidote protein, CC2985 family, at 93,678 to 93,899 _03060 H281DRAFT_03061: H281DRAFT_03061 - hypothetical protein, at 94,203 to 94,553 _03061 H281DRAFT_03062: H281DRAFT_03062 - Uncharacterized conserved protein YndB, AHSA1/START domain, at 94,740 to 95,186 _03062 H281DRAFT_03063: H281DRAFT_03063 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 95,358 to 96,155 _03063
Group Condition H281DRAFT_03059 H281DRAFT_03060 H281DRAFT_03061 H281DRAFT_03062 H281DRAFT_03063
phage Bu1_100 -0.6 N.D. -0.5 +0.2 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.3 N.D. -0.6 +0.3 -0.1
carbon source 2-furoic (C) +0.2 N.D. -0.5 +0.1 -0.4
carbon source Azelaic (C) +0.3 N.D. -1.0 +0.3 +0.1
carbon source propionate (C) +0.2 N.D. -0.6 +0.2 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.2 N.D. +0.7 -0.4 -0.4
carbon source Hexanoic (C) -0.0 N.D. +0.1 +0.3 -0.6
carbon source Protocatechuic Acid (C) +0.2 N.D. -0.5 +0.3 -0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 N.D. +0.6 -0.4 -0.2
carbon source D-Glucose (C) -0.1 N.D. +0.5 -0.2 -0.4
carbon source Malonic (C) -0.2 N.D. +0.6 -0.3 -0.1
carbon source Valeric (C) +0.3 N.D. +0.3 +0.1 -0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.0 N.D. +0.7 -0.2 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM +0.1 N.D. -0.3 +0.3 +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 N.D. +0.9 -0.1 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.0 N.D. -0.3 +0.6 +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 N.D. +1.0 -0.2 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.1 N.D. +0.7 -0.3 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 N.D. +0.7 -0.2 +0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.0 N.D. +1.0 -0.2 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 N.D. +0.9 -0.1 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.0 N.D. +0.9 -0.1 +0.1
carbon source D-Glucose 20 mM (C) +0.1 N.D. +0.7 -0.0 +0.2
carbon source D-Glucose 20 mM (C) -0.1 N.D. +0.9 +0.2 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 N.D. +0.5 -0.1 +0.4
carbon source acetate (C) -0.0 N.D. +0.4 +0.4 +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.1 N.D. +1.1 +0.0 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 N.D. +1.0 -0.1 +0.3
carbon source 2'-Deoxyinosine 10 mM (C) +0.1 N.D. +1.1 -0.2 +0.3
carbon source Malonic (C) +0.2 N.D. +0.4 +0.6 +0.3
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