Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03011 and H281DRAFT_03012 are separated by 104 nucleotidesH281DRAFT_03012 and H281DRAFT_03013 are separated by 96 nucleotidesH281DRAFT_03013 and H281DRAFT_03014 are separated by 364 nucleotidesH281DRAFT_03014 and H281DRAFT_03015 are separated by 33 nucleotides H281DRAFT_03011: H281DRAFT_03011 - NAD(P) transhydrogenase subunit beta, at 38,545 to 39,579 _03011 H281DRAFT_03012: H281DRAFT_03012 - hypothetical protein, at 39,684 to 39,989 _03012 H281DRAFT_03013: H281DRAFT_03013 - transcriptional regulator, LysR family, at 40,086 to 41,033 _03013 H281DRAFT_03014: H281DRAFT_03014 - MFS transporter, OFA family, oxalate/formate antiporter, at 41,398 to 42,744 _03014 H281DRAFT_03015: H281DRAFT_03015 - transcriptional regulator, LysR family, at 42,778 to 43,818 _03015
Group Condition H281DRAFT_03011 H281DRAFT_03012 H281DRAFT_03013 H281DRAFT_03014 H281DRAFT_03015
carbon source propionate (C) -0.3 -0.0 -0.0 -0.2 -1.2
carbon source Protocatechuic Acid (C) -0.2 -0.4 -0.2 -0.2 -0.5
carbon source succinate (C) -0.1 +0.2 -0.5 -0.1 -0.8
carbon source Protocatechuic Acid (C) -0.2 -0.5 -0.4 +0.0 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.4 -0.7 -0.0 -0.1 +0.0
carbon source D-Glucose (C) +0.3 -0.2 +0.1 -0.1 -1.2
carbon source Dodecandioic (C) -0.5 -0.0 -0.4 -0.2 +0.3
carbon source Malonic (C) -0.1 +0.2 +0.1 -0.1 -0.9
carbon source Malonic (C) +0.4 -0.2 -0.4 -0.1 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.3 -0.2 +0.4 +0.0 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -0.3 +0.3 +0.0 +0.1
carbon source Valeric (C) +0.2 +0.2 -0.7 -0.2 -0.0
phage Bu1_100 -0.3 +0.0 +0.4 +0.1 -0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.1 -0.6 +0.3 -0.1 +0.1
carbon source butyrate (C) +0.0 +0.7 -0.4 -0.2 -0.3
carbon source D-Glucose (C) +0.1 -0.4 -0.2 +0.2 +0.3
carbon source 2'-Deoxyinosine 10 mM (C) -0.6 +0.1 +0.4 -0.1 +0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 +0.1 -0.3 +0.1 +0.4
carbon source Azelaic (C) +0.3 +0.4 -0.2 -0.3 -0.1
carbon source Malonic (C) +0.3 -0.2 -0.2 -0.2 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 -0.3 +0.4 -0.2 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 -0.5 -0.1 +0.0 +0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 -0.1 +0.3 -0.5 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.5 +0.3 -0.4 -0.0 -0.2
carbon source Hexanoic (C) +0.1 -0.0 -0.4 +0.2 +0.6
carbon source Sebacic (C) +0.4 +0.4 -0.3 -0.2 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 +0.1 -0.3 +0.1 +0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.6 +0.3 +0.2 +0.1 +0.1
carbon source D,L-Lactate (C) +0.6 +0.5 -0.0 -0.0 +0.4
carbon source D-Glucose (C) +0.4 +0.4 -0.1 +0.3 +0.5
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