Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03006 and H281DRAFT_03007 are separated by 513 nucleotidesH281DRAFT_03007 and H281DRAFT_03008 are separated by 24 nucleotidesH281DRAFT_03008 and H281DRAFT_03009 are separated by 101 nucleotidesH281DRAFT_03009 and H281DRAFT_03010 are separated by 82 nucleotides H281DRAFT_03006: H281DRAFT_03006 - transcriptional regulator, GntR family, at 31,012 to 31,731 _03006 H281DRAFT_03007: H281DRAFT_03007 - acetolactate synthase-1/2/3 large subunit, at 32,245 to 34,008 _03007 H281DRAFT_03008: H281DRAFT_03008 - formyl-CoA transferase, at 34,033 to 35,280 _03008 H281DRAFT_03009: H281DRAFT_03009 - acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein, at 35,382 to 37,577 _03009 H281DRAFT_03010: H281DRAFT_03010 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), at 37,660 to 38,481 _03010
Group Condition H281DRAFT_03006 H281DRAFT_03007 H281DRAFT_03008 H281DRAFT_03009 H281DRAFT_03010
carbon source adipate (C) -2.6 +0.2 -0.2 -1.3 -0.8
carbon source 2-Deoxy-D-Ribose 10 mM (C) -2.6 +0.0 -0.2 +0.1 -1.4
carbon source butyrate (C) -2.0 -0.1 -0.1 -0.6 -1.0
carbon source 2-Deoxy-D-Ribose 20 mM (C) -1.8 -0.0 -0.1 -0.6 -0.9
carbon source 2-Deoxy-D-Ribose (C) -2.0 -0.1 +0.0 -1.0 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -2.0 -0.1 -0.1 -0.5 -0.5
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.9 -0.0 -0.4 -0.5 -0.3
carbon source 3-Hydroxypropionate (C) -1.3 -0.2 -0.4 -0.8 -0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -1.3 -0.0 -0.1 -1.2 -0.2
carbon source butyrate (C) -1.3 -0.0 +0.0 +0.2 -1.8
carbon source 3-Hydroxypropionate (C) -1.6 -0.1 -0.4 -0.3 -0.2
carbon source Glycerol (C) -1.8 -0.1 -0.2 -0.3 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -0.1 +0.0 -0.8 -0.4
carbon source 4-Methyl-2-oxopentanoic (C) -0.8 -0.1 -0.3 -0.7 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.1 -0.1 -0.0 -0.9 -0.3
carbon source 2'-Deoxyinosine 10 mM (C) -2.0 -0.2 -0.1 -0.2 +0.3
carbon source 2'-Deoxyinosine 5 mM (C) -1.4 -0.1 -0.5 -0.1 -0.2
carbon source Sebacic (C) -1.8 +0.2 -0.2 -0.2 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -1.2 -0.1 -0.2 -0.7 -0.1
carbon source Dodecandioic (C) -1.5 -0.3 -0.4 +0.1 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) -1.5 +0.0 -0.4 +0.0 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -1.0 +0.2 -0.2 -0.7 -0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) -2.0 +0.1 +0.1 +0.0 +0.1
carbon source adipate (C) -1.8 -0.3 +0.4 +0.0 +0.2
carbon source 2-Deoxy-D-Ribose (C) -1.8 +0.0 -0.1 -0.1 +0.6
carbon source 2-Deoxy-D-Ribose (C) -1.9 +0.1 +0.2 -0.2 +0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.9 -0.1 -0.4 -0.2 +0.7
carbon source D,L-Lactate (C) -1.2 +0.0 +0.3 +0.3 -0.4
phage Bu1_10 -0.2 +0.3 -0.4 +0.6 -0.8
phage Bu1_100 +0.0 +0.4 +0.2 +1.2 -0.5
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