Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_03003 and H281DRAFT_03004 are separated by 371 nucleotidesH281DRAFT_03004 and H281DRAFT_03005 are separated by 356 nucleotidesH281DRAFT_03005 and H281DRAFT_03006 overlap by 23 nucleotidesH281DRAFT_03006 and H281DRAFT_03007 are separated by 513 nucleotides H281DRAFT_03003: H281DRAFT_03003 - Cyanate permease, at 27,368 to 28,771 _03003 H281DRAFT_03004: H281DRAFT_03004 - MFS transporter, MHS family, shikimate and dehydroshikimate transport protein, at 29,143 to 30,459 _03004 H281DRAFT_03005: H281DRAFT_03005 - hypothetical protein, at 30,816 to 31,034 _03005 H281DRAFT_03006: H281DRAFT_03006 - transcriptional regulator, GntR family, at 31,012 to 31,731 _03006 H281DRAFT_03007: H281DRAFT_03007 - acetolactate synthase-1/2/3 large subunit, at 32,245 to 34,008 _03007
Group Condition H281DRAFT_03003 H281DRAFT_03004 H281DRAFT_03005 H281DRAFT_03006 H281DRAFT_03007
carbon source butyrate (C) -0.2 -0.0 -2.5 -2.0 -0.1
carbon source propionate (C) +0.0 -0.1 -2.2 -1.3 -0.4
carbon source Sebacic (C) -0.2 +0.1 -1.9 -1.8 +0.2
carbon source butyrate (C) +0.0 -0.3 -1.8 -1.3 -0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.2 -0.3 -0.1 -2.6 +0.0
carbon source adipate (C) +0.0 +0.0 -0.7 -2.6 +0.2
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.1 -0.3 -2.0 -0.1
carbon source Dodecandioic (C) -0.0 -0.1 -0.8 -1.5 -0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.0 -0.2 -0.7 -1.8 -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.6 -0.0 +0.3 -2.0 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 -0.2 -0.3 -2.0 -0.1
phage Bu1_100 -0.5 +0.0 -1.4 -0.5 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.2 +0.0 -0.6 -1.8 +0.0
carbon source 3-Hydroxypropionate (C) +0.1 -0.1 -0.9 -1.3 -0.2
carbon source Glycerol (C) -0.1 -0.1 -0.2 -1.8 -0.1
carbon source 3-Hydroxypropionate (C) -0.1 -0.0 -0.4 -1.6 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.0 -0.1 -0.2 -2.0 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.2 -0.1 -0.6 -1.1 -0.1
carbon source Azelaic (C) -0.1 +0.1 -0.8 -1.3 +0.1
carbon source adipate (C) -0.2 -0.0 +0.2 -1.8 -0.3
carbon source 2'-Deoxyinosine 5 mM (C) +0.0 -0.1 -0.6 -1.2 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.0 +0.1 -0.5 -1.5 +0.0
carbon source Hydroxy-L-Proline (C) +0.2 -0.1 -0.4 -1.4 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.1 -0.4 -1.3 -0.1
carbon source Valeric (C) +0.1 -0.0 -0.6 -1.1 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 -0.1 +0.4 -1.9 -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.0 -0.0 +0.3 -1.7 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.3 -0.6 -1.1 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.0 +0.6 -1.9 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 +0.2 +0.7 -0.9 -0.1
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