Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02999 and H281DRAFT_03000 are separated by 506 nucleotidesH281DRAFT_03000 and H281DRAFT_03001 are separated by 386 nucleotidesH281DRAFT_03001 and H281DRAFT_03002 are separated by 74 nucleotidesH281DRAFT_03002 and H281DRAFT_03003 are separated by 10 nucleotides H281DRAFT_02999: H281DRAFT_02999 - transcriptional regulator, AraC family, at 22,063 to 22,977 _02999 H281DRAFT_03000: H281DRAFT_03000 - hypothetical protein, at 23,484 to 23,909 _03000 H281DRAFT_03001: H281DRAFT_03001 - Autotransporter adhesin, at 24,296 to 27,154 _03001 H281DRAFT_03002: H281DRAFT_03002 - hypothetical protein, at 27,229 to 27,357 _03002 H281DRAFT_03003: H281DRAFT_03003 - Cyanate permease, at 27,368 to 28,771 _03003
Group Condition H281DRAFT_02999 H281DRAFT_03000 H281DRAFT_03001 H281DRAFT_03002 H281DRAFT_03003
carbon source 4-Hydroxybenzoic Acid (C) -0.1 N.D. -0.1 -0.6 -0.4
carbon source Azelaic (C) +0.0 N.D. -0.1 -0.9 -0.1
carbon source Phenylacetic (C) -0.1 N.D. -0.1 -0.3 -0.4
carbon source Protocatechuic Acid (C) -0.3 N.D. -0.1 -0.2 -0.3
carbon source Phenylacetic (C) -0.2 N.D. -0.1 -0.3 -0.3
carbon source p-Coumaric (C) +0.0 N.D. -0.1 -0.2 -0.6
carbon source Protocatechuic Acid (C) -0.2 N.D. -0.1 -0.3 -0.3
carbon source Hydroxy-L-Proline (C) +0.1 N.D. -0.2 -0.4 -0.3
carbon source Glycerol (C) +0.0 N.D. -0.2 -0.6 -0.1
carbon source Pimelic (C) -0.0 N.D. +0.0 -0.6 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.3 N.D. -0.2 +0.1 -0.2
carbon source 4-Methyl-2-oxopentanoic (C) +0.1 N.D. -0.1 -0.2 -0.3
carbon source 2'-Deoxyinosine 10 mM (C) +0.1 N.D. +0.0 +0.0 -0.6
phage Bu1_100 -0.6 N.D. +0.1 +0.2 -0.0
carbon source adipate (C) +0.2 N.D. -0.2 -0.4 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.2 N.D. +0.1 -0.3 -0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 N.D. -0.1 +0.3 -0.4
carbon source Valeric (C) +0.3 N.D. -0.3 -0.2 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 N.D. -0.0 +0.1 +0.4
carbon source 2'-Deoxyinosine 10 mM (C) +0.4 N.D. +0.1 -0.2 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.4 N.D. +0.1 -0.1 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 N.D. +0.0 +0.6 +0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.2 N.D. -0.1 +0.6 +0.0
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 N.D. -0.1 +0.4 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 N.D. +0.1 -0.4 +0.8
carbon source 2'-Deoxyinosine 5 mM (C) +0.5 N.D. +0.0 +0.2 +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.3 N.D. +0.1 +0.5 -0.1
carbon source D-Glucose (C) +0.3 N.D. +0.0 +0.3 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 N.D. +0.1 +0.3 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 N.D. +0.3 +0.6 +0.1
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