Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_02967	H281DRAFT_02968	H281DRAFT_02969	H281DRAFT_02970	H281DRAFT_02971
carbon source	Hexanoic (C)	N.D.	-0.6	N.D.	-0.2	-0.8
carbon source	2-Deoxy-D-Ribose (C)	N.D.	-1.1	N.D.	-0.3	-0.2
carbon source	Protocatechuic Acid (C)	N.D.	-0.6	N.D.	+0.0	-0.7
carbon source	acetate (C)	N.D.	-0.8	N.D.	-0.1	-0.3
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	-0.7	N.D.	+0.3	-0.7
carbon source	D-Glucose (C)	N.D.	-0.7	N.D.	+0.2	-0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	N.D.	-0.2	N.D.	+0.3	-0.8
carbon source	acetate (C)	N.D.	-0.5	N.D.	+0.2	-0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	-0.5	N.D.	+0.3	-0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	+0.1	N.D.	+0.4	-0.7
carbon source	2-Deoxy-D-ribonic lithium salt (C)	N.D.	-0.7	N.D.	-0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.9	N.D.	+1.2	-0.3
carbon source	Hexanoic (C)	N.D.	+0.3	N.D.	+0.5	-0.5
carbon source	Sebacic (C)	N.D.	+0.6	N.D.	+0.3	-0.6
carbon source	p-Coumaric (C)	N.D.	+0.6	N.D.	-0.4	+0.2
carbon source	Hydroxy-L-Proline (C)	N.D.	+0.4	N.D.	-0.5	+0.5
carbon source	butyrate (C)	N.D.	-0.4	N.D.	+0.4	+0.8
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM	N.D.	+0.7	N.D.	+0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.6	N.D.	-0.1	+0.6
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	+0.8	N.D.	+0.5	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	N.D.	+0.4	N.D.	+0.5	+0.3
phage	Bu1_10	N.D.	+0.6	N.D.	+0.5	+0.2
carbon source	3-hydroxybutyric (C)	N.D.	+0.1	N.D.	+0.3	+0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	N.D.	+1.1	+0.1
carbon source	Protocatechuic Acid (C)	N.D.	+0.4	N.D.	+0.3	+0.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	N.D.	+1.0	N.D.	-0.3	+0.8
carbon source	Malonic (C)	N.D.	+0.5	N.D.	-0.0	+1.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	N.D.	+0.6	N.D.	-0.2	+1.1
carbon source	2-Deoxy-D-Ribose 20 mM (C)	N.D.	+0.5	N.D.	+0.6	+0.6
phage	Bu1_100	N.D.	+1.5	N.D.	+0.0	+0.5