Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02858 and H281DRAFT_02859 are separated by 29 nucleotidesH281DRAFT_02859 and H281DRAFT_02860 overlap by 4 nucleotidesH281DRAFT_02860 and H281DRAFT_02861 are separated by 5 nucleotidesH281DRAFT_02861 and H281DRAFT_02863 are separated by 297 nucleotides H281DRAFT_02858: H281DRAFT_02858 - precorrin-4 C11-methyltransferase /precorrin-2 C20-methyltransferase, at 451,966 to 452,691 _02858 H281DRAFT_02859: H281DRAFT_02859 - precorrin-6A reductase (EC 1.3.1.54), at 452,721 to 453,443 _02859 H281DRAFT_02860: H281DRAFT_02860 - cobalt-precorrin-5B (C1)-methyltransferase, at 453,440 to 454,528 _02860 H281DRAFT_02861: H281DRAFT_02861 - precorrin-6Y C5,15-methyltransferase (decarboxylating), at 454,534 to 455,793 _02861 H281DRAFT_02863: H281DRAFT_02863 - precorrin-3B synthase, at 456,091 to 457,698 _02863
Group Condition H281DRAFT_02858 H281DRAFT_02859 H281DRAFT_02860 H281DRAFT_02861 H281DRAFT_02863
carbon source D-Glucose (C) N.D. -5.7 -5.3 N.D. -3.9
carbon source Protocatechuic Acid (C) N.D. -5.7 -3.4 N.D. -5.3
carbon source succinate (C) N.D. -6.0 -3.2 N.D. -4.3
carbon source succinate (C) N.D. -3.9 -3.0 N.D. -3.0
carbon source acetate (C) N.D. -2.3 -2.5 N.D. -3.7
carbon source Dodecandioic (C) N.D. -3.2 -2.0 N.D. -2.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. -3.3 -2.2 N.D. -1.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -2.7 -2.0 N.D. -2.2
carbon source Protocatechuic Acid (C) N.D. -1.8 -2.5 N.D. -2.6
carbon source acetate (C) N.D. -2.6 -1.7 N.D. -2.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -2.5 -1.7 N.D. -2.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. -3.9 -1.6 N.D. -1.0
carbon source Malonic (C) N.D. -1.4 -2.3 N.D. -2.2
carbon source Malonic (C) N.D. -1.3 -1.7 N.D. -2.2
carbon source propionate (C) N.D. -1.7 -1.0 N.D. -1.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -1.8 -1.4 N.D. -1.2
carbon source Sebacic (C) N.D. -1.7 -1.1 N.D. -1.4
carbon source propionate (C) N.D. -1.6 -1.1 N.D. -1.4
carbon source butyrate (C) N.D. -1.5 -1.3 N.D. -1.2
carbon source adipate (C) N.D. -1.3 -0.9 N.D. -1.7
carbon source Valeric (C) N.D. -0.8 -1.5 N.D. -1.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -1.1 -0.7 N.D. -1.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. -1.2 -1.1 N.D. -0.9
carbon source butyrate (C) N.D. -0.5 -1.4 N.D. -1.3
carbon source adipate (C) N.D. -1.6 -0.7 N.D. -0.6
carbon source Valeric (C) N.D. -0.6 -0.7 N.D. -1.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.8 -0.3 N.D. -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.6 -0.6 N.D. -1.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.8 +0.9 N.D. +0.8
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +1.2 +0.9 N.D. +0.7
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