Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02851 and H281DRAFT_02852 are separated by 94 nucleotidesH281DRAFT_02852 and H281DRAFT_02853 are separated by 659 nucleotidesH281DRAFT_02853 and H281DRAFT_02854 are separated by 146 nucleotidesH281DRAFT_02854 and H281DRAFT_02855 are separated by 47 nucleotides H281DRAFT_02851: H281DRAFT_02851 - TIGR00659 family protein, at 443,853 to 444,593 _02851 H281DRAFT_02852: H281DRAFT_02852 - porin, GBP family, at 444,688 to 445,833 _02852 H281DRAFT_02853: H281DRAFT_02853 - alpha,alpha-trehalase, at 446,493 to 448,187 _02853 H281DRAFT_02854: H281DRAFT_02854 - Alkylated DNA repair dioxygenase AlkB, at 448,334 to 448,915 _02854 H281DRAFT_02855: H281DRAFT_02855 - carbonic anhydrase, at 448,963 to 449,640 _02855
Group Condition H281DRAFT_02851 H281DRAFT_02852 H281DRAFT_02853 H281DRAFT_02854 H281DRAFT_02855
carbon source Protocatechuic Acid (C) N.D. -0.1 +0.1 -0.3 -1.2
carbon source 2-furoic (C) N.D. -0.1 -0.1 -0.2 -0.9
carbon source Malonic (C) N.D. +0.0 -0.1 -0.2 -1.0
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.0 -0.1 -0.2 -0.9
carbon source Phenylacetic (C) N.D. +0.1 +0.1 -0.1 -1.3
carbon source Phenylacetic (C) N.D. +0.0 +0.0 -0.2 -1.0
carbon source acetate (C) N.D. -0.1 +0.1 -0.1 -1.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.0 +0.1 -0.0 -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 +0.0 +0.1 -1.0
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.1 -0.1 +0.2 -0.9
carbon source butyrate (C) N.D. -0.1 -0.0 +0.2 -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 +0.1 +0.2 -1.0
carbon source Valeric (C) N.D. +0.2 +0.1 -0.5 -0.4
carbon source Protocatechuic Acid (C) N.D. +0.2 +0.0 +0.1 -0.9
carbon source Sebacic (C) N.D. +0.1 +0.2 +0.3 -1.2
carbon source Dodecandioic (C) N.D. +0.1 +0.2 +0.2 -1.0
carbon source D-Glucose 20 mM (C) N.D. -0.2 +0.1 +0.3 -0.7
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.2 +0.1 +0.3 -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.5 -0.1 -0.3 +0.4
carbon source Malonic (C) N.D. -0.2 -0.0 +0.4 -0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.0 -0.0 +0.4 -0.8
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.7 -0.0 -0.1 +0.4
carbon source Malonic (C) N.D. +0.1 +0.3 -0.1 -0.7
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -0.3 +0.1 +0.4 -0.4
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.2 +0.2 +0.3 -0.5
carbon source Hexanoic (C) N.D. +0.3 +0.1 +0.3 -0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.4 +0.0 +0.1 +0.6
phage Bu1_100 N.D. -0.3 -0.1 -0.1 +1.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. -0.5 +0.1 +0.1 +0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.3 +0.0 +0.8 -0.3
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