Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02829 and H281DRAFT_02830 are separated by 188 nucleotidesH281DRAFT_02830 and H281DRAFT_02831 are separated by 20 nucleotidesH281DRAFT_02831 and H281DRAFT_02832 are separated by 189 nucleotidesH281DRAFT_02832 and H281DRAFT_02833 are separated by 22 nucleotides H281DRAFT_02829: H281DRAFT_02829 - hypothetical protein, at 423,028 to 423,288 _02829 H281DRAFT_02830: H281DRAFT_02830 - hypothetical protein, at 423,477 to 423,713 _02830 H281DRAFT_02831: H281DRAFT_02831 - hypothetical protein, at 423,734 to 423,979 _02831 H281DRAFT_02832: H281DRAFT_02832 - hypothetical protein, at 424,169 to 424,381 _02832 H281DRAFT_02833: H281DRAFT_02833 - Cytochrome c, mono- and diheme variants, at 424,404 to 425,720 _02833
Group Condition H281DRAFT_02829 H281DRAFT_02830 H281DRAFT_02831 H281DRAFT_02832 H281DRAFT_02833
phage Bu1_10 N.D. -1.0 -2.0 -1.5 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 -0.4 -1.6 -0.2
carbon source butyrate (C) N.D. -1.9 +0.2 -0.5 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.3 -0.3 -1.2 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.6 -0.6 -0.0 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 -0.2 -1.1 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. +0.1 +0.2 -1.3 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.8 -0.6 +0.1 +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.6 +0.6 -1.1 -0.1
carbon source D-Glucose (C) N.D. +0.4 +0.0 -1.4 -0.1
carbon source D-Glucose (C) N.D. +0.5 -0.1 -1.1 -0.3
carbon source Azelaic (C) N.D. -0.1 +0.5 -1.1 -0.2
carbon source D-Glucose (C) N.D. +0.5 -0.2 -0.5 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.7 -0.7 +0.9 -0.1
carbon source D-Galactose (C) N.D. -0.3 +0.3 +0.3 -0.7
carbon source Dodecandioic (C) N.D. +0.6 +0.4 -1.2 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.4 +0.5 +0.4 -0.5
carbon source D-Glucose (C) N.D. +0.6 -0.6 +0.8 -0.4
carbon source acetate (C) N.D. -0.6 +0.4 +0.4 +0.3
phage Bu1_100 N.D. -0.6 -0.0 +1.1 +0.1
phage Bu1_100 N.D. +0.6 -0.9 +1.0 +0.5
carbon source Protocatechuic Acid (C) N.D. -0.3 +0.6 +0.8 +0.2
carbon source Valeric (C) N.D. -0.0 +0.6 +0.9 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.6 +0.2 +0.8 -0.0
carbon source Suberic (C) N.D. +0.3 +0.2 +0.9 +0.2
carbon source succinate (C) N.D. +0.4 +0.3 +0.8 +0.1
carbon source adipate (C) N.D. +0.8 +0.3 +0.6 +0.1
carbon source butyrate (C) N.D. +0.7 +0.9 +0.3 +0.1
carbon source Hexanoic (C) N.D. +0.3 +1.2 +0.7 -0.0
carbon source Sebacic (C) N.D. +0.6 +0.7 +0.8 +0.2
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