Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_02783 and H281DRAFT_02784 are separated by 166 nucleotidesH281DRAFT_02784 and H281DRAFT_02785 are separated by 52 nucleotidesH281DRAFT_02785 and H281DRAFT_02786 are separated by 262 nucleotidesH281DRAFT_02786 and H281DRAFT_02787 overlap by 41 nucleotides H281DRAFT_02783: H281DRAFT_02783 - hypothetical protein, at 373,613 to 373,921 _02783 H281DRAFT_02784: H281DRAFT_02784 - Uncharacterized conserved protein YecE, DUF72 family, at 374,088 to 375,008 _02784 H281DRAFT_02785: H281DRAFT_02785 - DNA polymerase, at 375,061 to 375,723 _02785 H281DRAFT_02786: H281DRAFT_02786 - hypothetical protein, at 375,986 to 376,156 _02786 H281DRAFT_02787: H281DRAFT_02787 - Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family, at 376,116 to 377,270 _02787
Group Condition H281DRAFT_02783 H281DRAFT_02784 H281DRAFT_02785 H281DRAFT_02786 H281DRAFT_02787
carbon source butyrate (C) N.D. +0.3 +0.0 N.D. -2.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.7 -1.0 N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.3 -0.3 N.D. -1.2
carbon source Azelaic (C) N.D. -0.6 +0.3 N.D. -1.4
carbon source D-Glucose 20 mM (C) N.D. -0.6 -0.8 N.D. -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.2 -0.1 N.D. -0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.7 -0.8 N.D. +0.4
phage Bu1_100 N.D. +0.4 +0.9 N.D. -2.4
carbon source succinate (C) N.D. -0.4 +0.2 N.D. -0.9
carbon source 2-furoic (C) N.D. +0.3 -0.4 N.D. -0.8
carbon source Protocatechuic Acid (C) N.D. +0.3 -0.5 N.D. -0.5
carbon source Malonic (C) N.D. -0.0 -1.0 N.D. +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.5 -0.8 N.D. +0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.7 -0.3 N.D. +0.4
carbon source L-Glutamic (C) N.D. +0.3 -0.6 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.2 +0.7 N.D. -0.0
carbon source succinate (C) N.D. -0.9 +0.2 N.D. +0.3
carbon source Hexanoic (C) N.D. -1.0 -0.1 N.D. +0.7
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.6 -0.6 N.D. +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. -0.8 +0.0 N.D. +0.6
carbon source butyrate (C) N.D. -0.7 +0.2 N.D. +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.7 +0.4 N.D. +0.4
carbon source Valeric (C) N.D. -0.7 +0.2 N.D. +0.8
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.3 -0.5 N.D. +0.5
phage Bu1_10 N.D. -0.6 +0.3 N.D. +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. +0.3 -0.4 N.D. +0.7
phage Bu1_100 N.D. +0.6 -0.5 N.D. +0.5
carbon source acetate (C) N.D. +0.6 +0.4 N.D. +0.4
carbon source adipate (C) N.D. +0.0 +0.5 N.D. +1.1
control NoPhageControl N.D. +0.7 +0.6 N.D. +0.8
remove
H281DRAFT_02783
plot		 remove
H281DRAFT_02784
plot		 remove
H281DRAFT_02785		 remove
H281DRAFT_02786
plot		 remove
H281DRAFT_02787
plot