Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02744 and H281DRAFT_02745 are separated by 163 nucleotidesH281DRAFT_02745 and H281DRAFT_02746 are separated by 51 nucleotidesH281DRAFT_02746 and H281DRAFT_02747 are separated by 312 nucleotidesH281DRAFT_02747 and H281DRAFT_02748 are separated by 86 nucleotides H281DRAFT_02744: H281DRAFT_02744 - Protein of unknown function (DUF3563), at 329,498 to 329,635 _02744 H281DRAFT_02745: H281DRAFT_02745 - Pimeloyl-ACP methyl ester carboxylesterase, at 329,799 to 330,608 _02745 H281DRAFT_02746: H281DRAFT_02746 - Nicotinamidase-related amidase, at 330,660 to 331,340 _02746 H281DRAFT_02747: H281DRAFT_02747 - hypothetical protein, at 331,653 to 332,063 _02747 H281DRAFT_02748: H281DRAFT_02748 - Head domain of trimeric autotransporter adhesin, at 332,150 to 336,334 _02748
Group Condition H281DRAFT_02744 H281DRAFT_02745 H281DRAFT_02746 H281DRAFT_02747 H281DRAFT_02748
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. -0.4 -0.7 -0.0
carbon source butyrate (C) N.D. N.D. -0.0 -0.8 -0.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. -0.3 -0.7 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -1.0 +0.3 +0.0
carbon source D-Glucose 20 mM (C) N.D. N.D. +0.1 -0.5 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.2 -0.5 +0.1
control NoPhageControl N.D. N.D. +0.1 -0.8 +0.1
carbon source Azelaic (C) N.D. N.D. +0.0 -0.7 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. N.D. -0.1 -0.5 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.5 +0.1 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.2 -0.5 +0.0
carbon source Phenylacetic (C) N.D. N.D. -0.3 +0.4 -0.1
carbon source D,L-Lactate (C) N.D. N.D. -0.4 +0.5 +0.0
phage Bu1_10 N.D. N.D. +0.5 -0.0 -0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. -0.3 +0.3 +0.2
carbon source Valeric (C) N.D. N.D. +0.2 +0.3 -0.2
carbon source propionate (C) N.D. N.D. -0.1 +0.4 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.2 +0.5 +0.1
carbon source D-Glucose (C) N.D. N.D. -0.1 +0.4 +0.2
carbon source acetate (C) N.D. N.D. -0.2 +0.6 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.2 +0.3 +0.3
carbon source succinate (C) N.D. N.D. +0.3 +0.4 +0.2
carbon source Dodecandioic (C) N.D. N.D. +0.1 +0.6 +0.2
carbon source Pimelic (C) N.D. N.D. +0.4 +0.4 +0.1
carbon source Suberic (C) N.D. N.D. +0.4 +0.5 +0.1
carbon source Protocatechuic Acid (C) N.D. N.D. +0.6 +0.3 +0.1
carbon source Hexanoic (C) N.D. N.D. +0.5 +0.4 +0.1
carbon source Sebacic (C) N.D. N.D. +0.2 +0.8 +0.1
carbon source acetate (C) N.D. N.D. +0.3 +0.6 +0.3
carbon source adipate (C) N.D. N.D. +0.6 +0.7 +0.1
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