Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02724 and H281DRAFT_02725 are separated by 73 nucleotidesH281DRAFT_02725 and H281DRAFT_02726 overlap by 11 nucleotidesH281DRAFT_02726 and H281DRAFT_02727 are separated by 176 nucleotidesH281DRAFT_02727 and H281DRAFT_02728 are separated by 11 nucleotides H281DRAFT_02724: H281DRAFT_02724 - Beta-lactamase class C and other penicillin binding proteins, at 309,263 to 310,315 _02724 H281DRAFT_02725: H281DRAFT_02725 - MFS transporter, MHS family, proline/betaine transporter, at 310,389 to 311,678 _02725 H281DRAFT_02726: H281DRAFT_02726 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase, at 311,668 to 313,116 _02726 H281DRAFT_02727: H281DRAFT_02727 - transcriptional regulator, LysR family, at 313,293 to 314,216 _02727 H281DRAFT_02728: H281DRAFT_02728 - Uncharacterized conserved protein, DUF1501 family, at 314,228 to 315,376 _02728
Group Condition H281DRAFT_02724 H281DRAFT_02725 H281DRAFT_02726 H281DRAFT_02727 H281DRAFT_02728
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -0.3 -0.5 -0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -0.4 +0.1 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.2 -0.2 -0.6 N.D.
carbon source 2-furoic (C) -0.2 +0.1 -0.8 -0.2 N.D.
carbon source butyrate (C) -0.9 +0.2 -0.2 -0.1 N.D.
carbon source propionate (C) -0.1 +0.1 -0.8 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.2 -0.9 -0.2 N.D.
carbon source Azelaic (C) -0.0 +0.3 -0.8 +0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.8 +0.4 -0.0 -0.1 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.2 -0.0 +0.6 -0.8 N.D.
carbon source D-Glucose (C) -0.3 +0.2 -0.5 +0.4 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.5 -0.0 +0.5 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.1 -0.6 +0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +0.2 -0.1 -0.5 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 +0.1 +0.1 +0.4 N.D.
phage Bu1_10 +0.5 -0.1 +0.6 -0.7 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.1 +0.5 +0.2 -0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.3 +0.1 +0.4 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.0 -0.3 +0.4 N.D.
carbon source Malonic (C) +0.1 -0.3 +0.6 +0.1 N.D.
carbon source butyrate (C) -0.4 -0.2 +1.0 +0.4 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.4 +0.0 +0.7 +0.5 N.D.
carbon source adipate (C) -0.0 +0.1 +0.9 -0.1 N.D.
carbon source Sebacic (C) -0.1 +0.3 +0.6 +0.1 N.D.
phage Bu1_100 -0.0 -0.3 +1.5 -0.2 N.D.
carbon source propionate (C) +0.1 +0.4 +0.5 +0.3 N.D.
control NoPhageControl +0.4 +0.1 +0.7 +0.1 N.D.
carbon source adipate (C) -0.1 +0.3 +0.5 +0.5 N.D.
phage Bu1_100 +0.3 -0.0 +0.7 +0.4 N.D.
carbon source Valeric (C) +0.3 +0.5 +0.5 +0.1 N.D.
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