Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_02659 and H281DRAFT_02660 are separated by 123 nucleotidesH281DRAFT_02660 and H281DRAFT_02661 are separated by 139 nucleotidesH281DRAFT_02661 and H281DRAFT_02662 are separated by 146 nucleotidesH281DRAFT_02662 and H281DRAFT_02663 are separated by 71 nucleotides H281DRAFT_02659: H281DRAFT_02659 - LysR family transcriptional regulator, cyn operon transcriptional activator, at 239,167 to 240,051 _02659 H281DRAFT_02660: H281DRAFT_02660 - formamidase, at 240,175 to 241,206 _02660 H281DRAFT_02661: H281DRAFT_02661 - transcriptional regulator, AraC family with amidase-like domain, at 241,346 to 243,721 _02661 H281DRAFT_02662: H281DRAFT_02662 - Predicted xylanase/chitin deacetylase, at 243,868 to 244,770 _02662 H281DRAFT_02663: H281DRAFT_02663 - hypothetical protein, at 244,842 to 245,435 _02663
Group Condition H281DRAFT_02659 H281DRAFT_02660 H281DRAFT_02661 H281DRAFT_02662 H281DRAFT_02663
ecofab LB in EcoFAB_3.5mL N.D. -0.3 +0.0 -1.7 N.D.
carbon source Gallic Acid (C) N.D. -0.4 +0.4 -1.4 N.D.
carbon source L-Glutamic (C) N.D. -0.2 +0.2 -1.2 N.D.
carbon source Azelaic (C) N.D. -0.5 -0.3 -0.3 N.D.
carbon source propionate (C) N.D. +0.3 -0.1 -1.3 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.4 -0.1 -0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.1 -0.0 -0.9 N.D.
carbon source D-Glucose (C) N.D. -0.0 +0.0 -1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.2 +0.3 -1.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 +0.6 -1.6 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.2 +0.1 -0.6 N.D.
carbon source Protocatechuic Acid (C) N.D. +0.1 -0.2 -0.6 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.2 +0.7 -0.9 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. +0.0 +0.3 -0.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.1 +0.6 -0.7 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.5 -0.0 +0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.4 +0.2 +0.4 N.D.
carbon source Protocatechuic Acid (C) N.D. -0.5 -0.2 +0.9 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. -0.1 -0.4 +1.0 N.D.
carbon source D,L-Lactate (C) N.D. +0.4 -0.3 +0.5 N.D.
carbon source Hexanoic (C) N.D. -0.1 +0.2 +0.6 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.9 +0.0 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.4 -0.4 +0.8 N.D.
carbon source Malonic (C) N.D. +0.2 -0.2 +0.8 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.7 -0.0 +0.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.4 +0.4 +0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.4 +0.1 +0.7 N.D.
phage Bu1_100 N.D. +0.2 +0.1 +1.1 N.D.
carbon source Sebacic (C) N.D. +0.4 +0.1 +1.0 N.D.
control NoPhageControl N.D. +0.1 +0.0 +1.5 N.D.
remove
H281DRAFT_02659
plot		 remove
H281DRAFT_02660
plot		 remove
H281DRAFT_02661		 remove
H281DRAFT_02662
plot		 remove
H281DRAFT_02663
plot