Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_02624 and H281DRAFT_02625 are separated by 18 nucleotidesH281DRAFT_02625 and H281DRAFT_02626 are separated by 243 nucleotidesH281DRAFT_02626 and H281DRAFT_02627 are separated by 147 nucleotidesH281DRAFT_02627 and H281DRAFT_02628 are separated by 104 nucleotides H281DRAFT_02624: H281DRAFT_02624 - 4-carboxymuconolactone decarboxylase, at 200,675 to 201,229 _02624 H281DRAFT_02625: H281DRAFT_02625 - amino acid ABC transporter substrate-binding protein, PAAT family, at 201,248 to 202,153 _02625 H281DRAFT_02626: H281DRAFT_02626 - hypothetical protein, at 202,397 to 203,149 _02626 H281DRAFT_02627: H281DRAFT_02627 - transcriptional regulator, LacI family, at 203,297 to 204,301 _02627 H281DRAFT_02628: H281DRAFT_02628 - hypothetical protein, at 204,406 to 204,501 _02628
Group Condition H281DRAFT_02624 H281DRAFT_02625 H281DRAFT_02626 H281DRAFT_02627 H281DRAFT_02628
carbon source Valeric (C) -1.7 +0.5 -0.4 N.D. N.D.
carbon source Azelaic (C) -0.3 -0.8 -0.6 N.D. N.D.
carbon source propionate (C) -0.7 +0.1 -0.3 N.D. N.D.
carbon source Gallic Acid (C) -0.5 -0.4 +0.2 N.D. N.D.
carbon source Malonic (C) -0.1 +0.1 -0.7 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.4 +0.4 -0.5 N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -0.3 +0.4 -0.4 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 -0.3 -0.3 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 -0.6 -0.0 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 -0.0 -0.4 N.D. N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.3 -0.5 +0.3 N.D. N.D.
carbon source Valeric (C) +0.1 +0.6 -0.5 N.D. N.D.
phage Bu1_100 +0.4 +0.6 -0.5 N.D. N.D.
phage Bu1_100 +0.4 -0.3 +0.4 N.D. N.D.
ecofab LB in EcoFAB_3.5mL +0.2 -0.2 +0.8 N.D. N.D.
carbon source Phenylacetic (C) -0.1 -0.1 +1.0 N.D. N.D.
carbon source D,L-Lactate (C) +0.7 -0.2 +0.4 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.4 -0.0 +0.4 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.6 -0.1 +0.4 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) +0.5 +0.2 +0.3 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.2 +0.4 N.D. N.D.
carbon source Gallic Acid (C) +0.2 +0.2 +0.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.1 +0.9 N.D. N.D.
carbon source L-Glutamic (C) +0.5 +0.0 +0.6 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.7 +0.1 +0.3 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 +0.7 +0.9 N.D. N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.3 +0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +0.1 +0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.0 +0.8 N.D. N.D.
phage Bu1_10 +0.0 +0.4 +1.0 N.D. N.D.
remove
H281DRAFT_02624
plot		 remove
H281DRAFT_02625
plot		 remove
H281DRAFT_02626		 remove
H281DRAFT_02627
plot		 remove
H281DRAFT_02628
plot