Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02598 and H281DRAFT_02599 are separated by 2 nucleotidesH281DRAFT_02599 and H281DRAFT_02600 are separated by 635 nucleotidesH281DRAFT_02600 and H281DRAFT_02601 are separated by 911 nucleotidesH281DRAFT_02601 and H281DRAFT_02602 are separated by 10 nucleotides H281DRAFT_02598: H281DRAFT_02598 - carboxylesterase, at 172,652 to 173,533 _02598 H281DRAFT_02599: H281DRAFT_02599 - hypothetical protein, at 173,536 to 174,210 _02599 H281DRAFT_02600: H281DRAFT_02600 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 174,846 to 175,448 _02600 H281DRAFT_02601: H281DRAFT_02601 - two-component system, OmpR family, sensor histidine kinase TctE, at 176,360 to 177,730 _02601 H281DRAFT_02602: H281DRAFT_02602 - DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain, at 177,741 to 178,415 _02602
Group Condition H281DRAFT_02598 H281DRAFT_02599 H281DRAFT_02600 H281DRAFT_02601 H281DRAFT_02602
carbon source Hexanoic (C) -0.4 -0.5 -3.6 N.D. -0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -0.0 -1.8 N.D. -0.6
carbon source Protocatechuic Acid (C) +0.0 -0.8 -1.6 N.D. -0.3
carbon source Malonic (C) -0.2 -0.3 -1.2 N.D. -0.8
phage Bu1_10 -0.4 +0.4 -1.2 N.D. -1.3
carbon source acetate (C) -0.5 -0.5 -0.1 N.D. -1.1
carbon source D-Glucose (C) -0.6 -0.4 -0.5 N.D. -0.6
carbon source Hexanoic (C) -0.0 +0.4 -1.3 N.D. -1.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 -1.1 +0.9 N.D. -1.5
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 +0.1 -0.6 N.D. -1.4
carbon source Valeric (C) -0.3 -0.1 -1.6 N.D. +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.6 +0.4 -0.9 N.D. -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.4 -0.1 -1.3 N.D. +0.4
phage Bu1_100 -0.2 +0.5 -1.3 N.D. -0.4
carbon source Azelaic (C) +0.1 -0.3 -1.4 N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.5 +0.5 N.D. -1.2
carbon source 2-Deoxy-D-Ribose (C) -0.0 +0.4 -0.5 N.D. -1.0
carbon source Protocatechuic Acid (C) -0.7 +0.4 +0.4 N.D. -1.3
phage Bu1_100 +0.1 +0.4 +0.0 N.D. -1.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 -0.3 -0.9 N.D. +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 +0.7 -0.7 N.D. -0.5
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.3 +0.6 -1.1 N.D. -0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.3 +1.0 -0.7 N.D. -1.1
carbon source D,L-Lactate (C) -0.4 +0.5 +0.4 N.D. -0.6
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 +0.3 -0.7 N.D. +0.7
carbon source Protocatechuic Acid (C) +0.4 +0.5 +0.4 N.D. -0.8
carbon source Valeric (C) -0.3 -0.4 +0.6 N.D. +0.9
carbon source 4-Hydroxybenzoic Acid (C) +0.8 -0.5 +0.6 N.D. +0.3
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 +0.9 +0.8 N.D. -0.2
carbon source adipate (C) -0.1 +0.0 +0.8 N.D. +1.3
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