Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 128 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
H281DRAFT_02464 and H281DRAFT_02465 are separated by 45 nucleotides
H281DRAFT_02465 and H281DRAFT_02466 are separated by 238 nucleotides
H281DRAFT_02466 and H281DRAFT_02467 are separated by 96 nucleotides
H281DRAFT_02467 and H281DRAFT_02468 are separated by 531 nucleotides
H281DRAFT_02464: H281DRAFT_02464 - betaine aldehyde dehydrogenase, at 32,179 to 33,648
_02464
H281DRAFT_02465: H281DRAFT_02465 - transcriptional regulator, TetR family, at 33,694 to 34,287
_02465
H281DRAFT_02466: H281DRAFT_02466 - glutathione-independent formaldehyde dehydrogenase, at 34,526 to 35,725
_02466
H281DRAFT_02467: H281DRAFT_02467 - transcriptional regulator, AraC family with amidase-like domain, at 35,822 to 36,817
_02467
H281DRAFT_02468: H281DRAFT_02468 - serine hydroxymethyltransferase, at 37,349 to 38,623
_02468
Group
Condition
H281DRAFT
_02464
H281DRAFT
_02465
H281DRAFT
_02466
H281DRAFT
_02467
H281DRAFT
_02468
carbon source
Hexanoic (C)
-0.3
-1.0
-0.4
-0.9
-0.3
carbon source
adipate (C)
-0.3
-0.2
-0.4
-0.2
-0.7
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.3
-0.3
-0.1
-0.6
-0.6
in planta
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.2
-0.3
-0.1
+0.2
-1.3
supernatant
LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
-0.6
-0.3
+0.2
-0.8
-0.2
carbon source
Sebacic (C)
+0.3
-0.1
-0.4
-0.9
-0.3
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.2
-0.6
+0.4
-0.3
-0.7
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.2
-0.1
-0.2
-0.1
-1.1
carbon source
Valeric (C)
-0.6
-0.6
-0.2
+0.3
-0.2
carbon source
Azelaic (C)
-0.6
-0.5
-0.2
+0.6
-0.3
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
-0.1
-0.1
-0.2
-0.8
+0.1
phage
Bu1_10
-0.6
-1.2
+0.3
+0.2
+0.2
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.2
-0.4
+0.2
-0.9
+0.0
carbon source
D-Glucose (C)
-0.4
-0.2
-0.3
+0.3
-0.2
carbon source
Valeric (C)
+0.5
-0.9
-0.1
-0.1
-0.3
phage
Bu1_100
-0.6
-0.4
-0.3
-0.1
+0.7
carbon source
propionate (C)
+0.2
-0.6
-0.2
+0.2
-0.3
carbon source
Hexanoic (C)
-0.1
-1.0
-0.4
+0.7
+0.0
carbon source
acetate (C)
-0.2
-0.6
-0.2
+0.5
-0.1
supernatant
LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
-0.2
-0.4
+0.0
+0.4
-0.3
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.2
+0.0
+0.2
-0.7
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
-0.2
-0.3
+0.1
+0.2
-0.4
carbon source
Gallic Acid (C)
-0.3
-0.2
-0.4
+0.4
+0.1
carbon source
butyrate (C)
-0.4
-0.2
-0.1
+0.3
+0.2
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.4
-0.4
+0.2
-0.3
+0.2
carbon source
2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
+0.3
-0.3
+0.3
-0.4
+0.2
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.2
+0.3
+0.3
-0.4
-0.2
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.0
-0.6
+0.0
+0.7
+0.2
carbon source
D-Glucose (C)
+0.4
-0.2
+0.2
+0.3
-0.2
carbon source
2-Deoxy-D-Ribose (C)
-0.3
+0.5
+0.4
+0.3
+0.1
remove
H281DRAFT_02464
plot
remove
H281DRAFT_02465
plot
remove
H281DRAFT_02466
remove
H281DRAFT_02467
plot
remove
H281DRAFT_02468
plot