Fitness for 3 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02435 and H281DRAFT_02436 are separated by 18 nucleotidesH281DRAFT_02436 and H281DRAFT_02437 are separated by 136 nucleotides H281DRAFT_02435: H281DRAFT_02435 - protein FliT, at 608,681 to 608,980 _02435 H281DRAFT_02436: H281DRAFT_02436 - flagellar hook-associated protein 2, at 608,999 to 610,525 _02436 H281DRAFT_02437: H281DRAFT_02437 - flagellin, at 610,662 to 611,618 _02437
Group Condition H281DRAFT_02435 H281DRAFT_02436 H281DRAFT_02437
ecofab LB in EcoFAB_3.5mL N.D. -2.1 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -2.1 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.9 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.1 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.5 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -1.3 -0.1
carbon source Hexanoic (C) N.D. -1.1 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.0 -0.2
carbon source Hexanoic (C) N.D. -0.3 -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.9 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. -0.9 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -1.1 +0.0
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.6 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. -1.0 +0.1
carbon source Gallic Acid (C) N.D. -0.7 -0.2
carbon source D-Glucose 20 mM (C) N.D. -0.7 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -0.9 +0.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.6 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.4 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.5 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -1.0 +0.3
carbon source Phenylacetic (C) N.D. -0.5 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. -0.7 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -0.8 +0.2
carbon source butyrate (C) N.D. -0.6 +0.2
carbon source succinate (C) N.D. -0.5 +0.2
carbon source D-Glucose (C) N.D. +0.7 -0.1
carbon source D-Glucose (C) N.D. +0.5 +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.7 +0.0
carbon source D-Glucose (C) N.D. +1.0 -0.0
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