Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02405 and H281DRAFT_02406 are separated by 99 nucleotidesH281DRAFT_02406 and H281DRAFT_02407 are separated by 263 nucleotidesH281DRAFT_02407 and H281DRAFT_02408 are separated by 27 nucleotidesH281DRAFT_02408 and H281DRAFT_02409 are separated by 116 nucleotides H281DRAFT_02405: H281DRAFT_02405 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 574,906 to 576,054 _02405 H281DRAFT_02406: H281DRAFT_02406 - acetolactate synthase-1/2/3 large subunit, at 576,154 to 577,872 _02406 H281DRAFT_02407: H281DRAFT_02407 - L-serine ammonia-lyase, at 578,136 to 579,524 _02407 H281DRAFT_02408: H281DRAFT_02408 - Alginate lyase, at 579,552 to 580,682 _02408 H281DRAFT_02409: H281DRAFT_02409 - glycine dehydrogenase, at 580,799 to 583,735 _02409
Group Condition H281DRAFT_02405 H281DRAFT_02406 H281DRAFT_02407 H281DRAFT_02408 H281DRAFT_02409
carbon source butyrate (C) +0.1 -0.2 -0.1 -0.3 -2.2
carbon source butyrate (C) -0.2 -0.1 -0.1 -0.1 -2.2
phage Bu1_100 -1.4 -0.0 +0.1 -0.6 -0.1
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.1 -1.0 -0.3 -0.6
carbon source Suberic (C) -0.2 -0.0 -0.1 -0.3 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.2 -0.5 -0.5 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.1 -0.5 -0.4 -0.6
carbon source Hexanoic (C) +0.2 -0.1 +0.0 -0.3 -1.2
phage Bu1_100 -1.0 +0.1 +0.1 -0.7 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.0 -0.4 -0.3 -0.7
phage Bu1_10 -0.8 +0.0 +0.1 -0.4 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.1 -0.8 -0.2 -0.5
carbon source Hexanoic (C) +0.2 -0.0 +0.1 -0.4 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.0 -0.8 -0.1 -0.6
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.0 -0.6 -0.2 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.1 -0.5 -0.2 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 -0.1 -0.8 +0.1 -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 -0.0 -1.0 +0.2 -0.6
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 -0.1 +0.3 -0.2 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.4 -0.2 -0.6 -0.1 -0.5
carbon source Phenylacetic (C) +0.8 -0.1 +0.4 -0.1 -1.1
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 +0.2 +0.5 -0.3 -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 -0.0 -0.3 -0.1 -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.4 -0.1 -0.8 +0.4 -0.7
carbon source Phenylacetic (C) +0.9 -0.0 +0.5 -0.1 -0.9
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.4 +0.1 +0.5 -0.2 -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.0 -0.2 -0.2 -0.0 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.4 +0.0 -0.7 -0.1 -0.2
carbon source Hydroxy-L-Proline (C) +1.2 -0.1 +0.2 -0.2 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.4 -0.1 -0.3 -0.2 -0.1
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H281DRAFT_02405
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H281DRAFT_02406
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H281DRAFT_02409
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