Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02376 and H281DRAFT_02377 are separated by 55 nucleotidesH281DRAFT_02377 and H281DRAFT_02378 are separated by 166 nucleotidesH281DRAFT_02378 and H281DRAFT_02379 overlap by 1 nucleotidesH281DRAFT_02379 and H281DRAFT_02380 are separated by 516 nucleotides H281DRAFT_02376: H281DRAFT_02376 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 538,260 to 539,018 _02376 H281DRAFT_02377: H281DRAFT_02377 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 539,074 to 540,288 _02377 H281DRAFT_02378: H281DRAFT_02378 - amino acid/amide ABC transporter membrane protein 1, HAAT family, at 540,455 to 541,339 _02378 H281DRAFT_02379: H281DRAFT_02379 - amino acid/amide ABC transporter membrane protein 2, HAAT family, at 541,339 to 542,310 _02379 H281DRAFT_02380: H281DRAFT_02380 - amino acid/amide ABC transporter substrate-binding protein, HAAT family, at 542,827 to 543,993 _02380
Group Condition H281DRAFT_02376 H281DRAFT_02377 H281DRAFT_02378 H281DRAFT_02379 H281DRAFT_02380
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.2 -0.7 -0.7 -0.9 -0.1
carbon source 2-Deoxy-D-Ribose (C) -1.3 -0.7 -0.5 -0.6 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 -0.7 -0.6 -1.1 +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.5 -0.7 -1.0 -0.8 +0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.4 -0.6 -0.6 -0.7 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.2 -0.5 -0.3 -0.9 +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.7 -0.3 -0.4 -0.5 +0.0
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.4 -0.3 -0.7 -0.0
carbon source 3-hydroxybutyric (C) -0.4 -0.3 -0.3 -0.4 -0.1
carbon source adipate (C) -0.6 -0.2 -0.5 -0.3 +0.2
carbon source 3-hydroxybutyric (C) -0.2 -0.1 -0.4 -0.3 -0.2
carbon source Pimelic (C) -0.4 -0.2 -0.3 -0.5 +0.2
carbon source adipate (C) -0.1 -0.2 -0.3 -0.5 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.2 +0.4 +0.5 +0.2 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 +0.3 +0.4 +0.3 +0.0
carbon source Dodecandioic (C) +0.4 +0.2 +0.4 +0.3 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.7 +0.2 -0.0 +0.3 +0.2
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 +0.4 +0.4 +0.2 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) +0.0 +0.6 +0.5 +0.3 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.2 +0.5 +0.5 +0.2
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.2 +0.2 +0.5 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +0.2 +0.2 +0.4 +0.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.5 +0.4 +0.5 +0.3 -0.0
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.2 +0.6 +0.5 +0.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.6 +0.3 +0.5 +0.4 +0.0
phage Bu1_10 +0.8 +0.3 +0.2 +0.3 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +1.0 +0.3 +0.2 +0.4 +0.3
carbon source Hydroxy-L-Proline (C) +0.8 +0.6 +0.8 +0.4 -0.2
carbon source Hexanoic (C) +1.0 +0.3 +1.5 +1.2 -0.1
carbon source Hexanoic (C) +1.0 +0.5 +1.3 +1.1 +0.1
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