Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02360 and H281DRAFT_02361 are separated by 865 nucleotidesH281DRAFT_02361 and H281DRAFT_02362 are separated by 98 nucleotidesH281DRAFT_02362 and H281DRAFT_02363 are separated by 537 nucleotidesH281DRAFT_02363 and H281DRAFT_02364 are separated by 126 nucleotides H281DRAFT_02360: H281DRAFT_02360 - tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein, at 519,232 to 521,211 _02360 H281DRAFT_02361: H281DRAFT_02361 - transporter, CPA2 family, at 522,077 to 523,282 _02361 H281DRAFT_02362: H281DRAFT_02362 - carboxylate-amine ligase, at 523,381 to 524,496 _02362 H281DRAFT_02363: H281DRAFT_02363 - transcriptional regulator, MarR family, at 525,034 to 525,672 _02363 H281DRAFT_02364: H281DRAFT_02364 - GMP synthase (glutamine-hydrolysing), at 525,799 to 526,512 _02364
Group Condition H281DRAFT_02360 H281DRAFT_02361 H281DRAFT_02362 H281DRAFT_02363 H281DRAFT_02364
carbon source succinate (C) -0.1 -2.6 -2.4 N.D. -0.3
carbon source succinate (C) +0.0 -2.8 -2.7 N.D. +0.2
carbon source propionate (C) +0.1 -2.0 -1.7 N.D. -0.4
carbon source propionate (C) -0.0 -1.7 -1.7 N.D. -0.0
carbon source acetate (C) +0.2 -1.5 -1.4 N.D. -0.4
carbon source Dodecandioic (C) +0.2 -1.4 -1.1 N.D. -0.4
carbon source Suberic (C) -0.0 -1.2 -1.3 N.D. -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.9 -0.9 N.D. -0.3
carbon source D-Glucose (C) -0.0 -1.1 -1.0 N.D. -0.1
carbon source Pimelic (C) +0.1 -1.0 -0.8 N.D. -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.6 -0.5 N.D. -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -0.8 -0.8 N.D. -0.2
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.6 -0.6 N.D. -0.6
carbon source acetate (C) +0.1 -0.8 -1.2 N.D. +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 -0.4 -0.4 N.D. -0.7
phage Bu1_10 -0.2 -0.3 -0.7 N.D. -0.4
carbon source Malonic (C) -0.1 -0.7 -1.0 N.D. +0.2
lb LB -0.1 -0.7 -0.4 N.D. -0.3
carbon source propionate (C) -0.1 -0.3 -0.6 N.D. -0.4
carbon source Phenylacetic (C) -0.1 -0.6 -0.6 N.D. -0.0
carbon source Protocatechuic Acid (C) -0.1 -0.2 -0.3 N.D. -0.7
carbon source butyrate (C) -0.2 +0.4 +0.4 N.D. -0.6
carbon source 2-Deoxy-D-Ribose (C) +0.1 +0.4 +0.2 N.D. -0.6
carbon source Protocatechuic Acid (C) -0.1 +0.3 +0.7 N.D. -0.5
carbon source butyrate (C) +0.1 +0.4 +0.5 N.D. -0.4
carbon source Sebacic (C) +0.1 +0.5 +0.7 N.D. -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 +0.9 +0.8 N.D. -0.2
carbon source Azelaic (C) +0.3 +0.8 +1.0 N.D. -0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 +0.9 +0.9 N.D. +0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.4 +1.9 +1.7 N.D. -0.1
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