Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_02326 and H281DRAFT_02327 are separated by 72 nucleotidesH281DRAFT_02327 and H281DRAFT_02328 are separated by 501 nucleotidesH281DRAFT_02328 and H281DRAFT_02329 are separated by 272 nucleotidesH281DRAFT_02329 and H281DRAFT_02330 are separated by 50 nucleotides H281DRAFT_02326: H281DRAFT_02326 - histidine triad (HIT) family protein, at 482,763 to 483,188 _02326 H281DRAFT_02327: H281DRAFT_02327 - hypothetical protein, at 483,261 to 483,440 _02327 H281DRAFT_02328: H281DRAFT_02328 - hypothetical protein, at 483,942 to 484,280 _02328 H281DRAFT_02329: H281DRAFT_02329 - dihydroxyacid dehydratase, at 484,553 to 486,286 _02329 H281DRAFT_02330: H281DRAFT_02330 - L-arabinose ABC transporter membrane protein, at 486,337 to 487,341 _02330
Group Condition H281DRAFT_02326 H281DRAFT_02327 H281DRAFT_02328 H281DRAFT_02329 H281DRAFT_02330
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 N.D. N.D. -0.8 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 N.D. N.D. -1.1 -0.1
carbon source Gallic Acid (C) -0.6 N.D. N.D. -0.4 -0.3
carbon source acetate (C) -0.7 N.D. N.D. -0.3 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 N.D. N.D. -1.3 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. N.D. -0.7 -0.1
carbon source adipate (C) -0.4 N.D. N.D. -0.3 -0.3
carbon source Valeric (C) -0.8 N.D. N.D. -0.2 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. N.D. -0.6 -0.2
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 N.D. N.D. -0.4 -0.3
carbon source Malonic (C) -0.5 N.D. N.D. -0.3 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 N.D. N.D. -0.0 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 N.D. N.D. -0.4 -0.3
carbon source Valeric (C) -0.5 N.D. N.D. -0.1 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.5 N.D. N.D. -0.3 +0.0
carbon source butyrate (C) -0.6 N.D. N.D. +0.2 -0.2
carbon source propionate (C) +0.2 N.D. N.D. -0.3 -0.4
phage Bu1_100 -0.6 N.D. N.D. +0.2 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.6 N.D. N.D. -0.0 +0.2
carbon source butyrate (C) +0.3 N.D. N.D. -0.7 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 N.D. N.D. -0.5 +0.4
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 N.D. N.D. -0.4 -0.2
carbon source L-Glutamic (C) -0.4 N.D. N.D. +0.3 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.4 N.D. N.D. +0.3 +0.1
carbon source Azelaic (C) -0.2 N.D. N.D. +0.6 -0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 N.D. N.D. -0.3 -0.1
carbon source 2-Deoxy-D-Ribose (C) +0.4 N.D. N.D. +0.2 -0.2
carbon source D-Glucose (C) +0.4 N.D. N.D. +0.2 -0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.5 N.D. N.D. +0.2 +0.1
carbon source D-Glucose 20 mM (C) +0.5 N.D. N.D. +0.5 +0.0
remove
H281DRAFT_02326
plot		 remove
H281DRAFT_02327
plot		 remove
H281DRAFT_02328		 remove
H281DRAFT_02329
plot		 remove
H281DRAFT_02330
plot