Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02320 and H281DRAFT_02321 are separated by 169 nucleotidesH281DRAFT_02321 and H281DRAFT_02322 are separated by 243 nucleotidesH281DRAFT_02322 and H281DRAFT_02323 are separated by 90 nucleotidesH281DRAFT_02323 and H281DRAFT_02324 are separated by 114 nucleotides H281DRAFT_02320: H281DRAFT_02320 - tRNA modification GTPase trmE, at 475,481 to 476,875 _02320 H281DRAFT_02321: H281DRAFT_02321 - Site-specific recombinase XerD, at 477,045 to 478,256 _02321 H281DRAFT_02322: H281DRAFT_02322 - hypothetical protein, at 478,500 to 478,661 _02322 H281DRAFT_02323: H281DRAFT_02323 - hypothetical protein, at 478,752 to 479,096 _02323 H281DRAFT_02324: H281DRAFT_02324 - pyruvate dehydrogenase E1 component, at 479,211 to 481,946 _02324
Group Condition H281DRAFT_02320 H281DRAFT_02321 H281DRAFT_02322 H281DRAFT_02323 H281DRAFT_02324
carbon source 2-furoic (C) N.D. -0.1 -0.5 -0.4 -0.1
carbon source Hydroxy-L-Proline (C) N.D. -0.0 -0.6 -0.3 -0.1
carbon source D,L-Lactate (C) N.D. -0.1 -0.6 -0.2 +0.0
carbon source adipate (C) N.D. -0.0 -0.5 -0.3 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.2 -0.3 -0.2 -0.2
carbon source D-Galactose (C) N.D. -0.1 -0.6 -0.0 -0.1
phage Bu1_10 N.D. -0.2 -0.6 +0.1 -0.1
carbon source 3-hydroxybutyric (C) N.D. -0.2 -0.5 -0.0 -0.1
control NoPhageControl N.D. -0.1 -0.5 -0.2 +0.0
carbon source Hexanoic (C) N.D. -0.2 -0.5 +0.0 +0.0
carbon source succinate (C) N.D. +0.0 -0.3 -0.4 +0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.1 -0.5 +0.2 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.0 -0.6 +0.3 +0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.3 +0.4 +0.0 -0.1
carbon source Valeric (C) N.D. -0.1 +0.6 -0.4 +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.1 +0.5 -0.2 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.2 +0.4 +0.1 -0.1
carbon source acetate (C) N.D. -0.1 +0.5 -0.2 +0.0
carbon source Protocatechuic Acid (C) N.D. -0.3 +0.7 -0.2 +0.0
carbon source propionate (C) N.D. -0.2 +0.8 -0.3 -0.0
carbon source Sebacic (C) N.D. -0.1 +0.5 +0.2 -0.2
ecofab LB in EcoFAB_3.5mL N.D. -0.1 +0.5 +0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 +0.8 -0.2 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.1 +0.5 +0.2 -0.1
carbon source Hexanoic (C) N.D. -0.2 +0.7 -0.1 +0.1
carbon source Azelaic (C) N.D. -0.1 +0.6 +0.3 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.1 +0.7 +0.0 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 +0.8 -0.2 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 +0.9 -0.2 +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.0 +1.0 +0.1 -0.0
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