Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02243 and H281DRAFT_02244 are separated by 249 nucleotidesH281DRAFT_02244 and H281DRAFT_02245 are separated by 156 nucleotidesH281DRAFT_02245 and H281DRAFT_02246 are separated by 343 nucleotidesH281DRAFT_02246 and H281DRAFT_02247 are separated by 373 nucleotides H281DRAFT_02243: H281DRAFT_02243 - Thiol-disulfide isomerase or thioredoxin, at 388,028 to 388,405 _02243 H281DRAFT_02244: H281DRAFT_02244 - DNA topoisomerase-3, at 388,655 to 391,324 _02244 H281DRAFT_02245: H281DRAFT_02245 - transcriptional regulator, LysR family, at 391,481 to 392,584 _02245 H281DRAFT_02246: H281DRAFT_02246 - phosphoenolpyruvate carboxykinase (GTP), at 392,928 to 394,796 _02246 H281DRAFT_02247: H281DRAFT_02247 - D-3-phosphoglycerate dehydrogenase, at 395,170 to 396,183 _02247
Group Condition H281DRAFT_02243 H281DRAFT_02244 H281DRAFT_02245 H281DRAFT_02246 H281DRAFT_02247
carbon source Dodecandioic (C) N.D. N.D. -5.0 -0.1 +0.1
carbon source Phenylacetic (C) N.D. N.D. -5.0 +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -5.1 +0.4 +0.5
phage Bu1_10 N.D. N.D. -2.6 -0.4 -0.3
carbon source p-Coumaric (C) N.D. N.D. -3.1 +0.1 +0.1
phage Bu1_100 N.D. N.D. -2.3 -0.1 -0.4
carbon source p-Coumaric (C) N.D. N.D. -3.0 +0.1 +0.2
carbon source Azelaic (C) N.D. N.D. -2.2 -0.3 -0.1
carbon source Phenylacetic (C) N.D. N.D. -3.1 +0.2 +0.4
carbon source Sebacic (C) N.D. N.D. -2.3 -0.1 -0.1
carbon source Hexanoic (C) N.D. N.D. -1.6 +0.2 -0.4
phage Bu1_100 N.D. N.D. -2.0 -0.0 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -1.6 -0.0 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -1.6 +0.0 +0.1
carbon source Protocatechuic Acid (C) N.D. N.D. -0.5 -0.2 -0.2
carbon source Hexanoic (C) N.D. N.D. -1.2 +0.5 -0.1
carbon source butyrate (C) N.D. N.D. -0.2 +0.4 -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.7 +0.2 +0.1
carbon source butyrate (C) N.D. N.D. -0.4 +0.3 -0.2
carbon source propionate (C) N.D. N.D. -0.5 +0.4 -0.1
carbon source D-Glucose (C) N.D. N.D. -0.5 +0.4 +0.2
carbon source propionate (C) N.D. N.D. -0.2 +0.6 -0.3
carbon source D-Glucose (C) N.D. N.D. -0.3 +0.3 +0.4
carbon source propionate (C) N.D. N.D. +0.0 +0.8 -0.4
carbon source 3-Hydroxypropionate (C) N.D. N.D. +0.2 +0.5 -0.3
carbon source adipate (C) N.D. N.D. +0.7 +0.1 -0.3
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.5 +0.1 +0.4
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. +0.7 -0.0 +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.7 +0.1 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.7 +0.2 +0.5
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