Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02232 and H281DRAFT_02233 are separated by 380 nucleotidesH281DRAFT_02233 and H281DRAFT_02234 are separated by 95 nucleotidesH281DRAFT_02234 and H281DRAFT_02235 are separated by 0 nucleotidesH281DRAFT_02235 and H281DRAFT_02236 overlap by 11 nucleotides H281DRAFT_02232: H281DRAFT_02232 - preQ(0) biosynthesis protein QueC, at 376,625 to 377,356 _02232 H281DRAFT_02233: H281DRAFT_02233 - tRNA_Phe_GAA, at 377,737 to 377,812 _02233 H281DRAFT_02234: H281DRAFT_02234 - two component transcriptional regulator, Fis family, at 377,908 to 378,600 _02234 H281DRAFT_02235: H281DRAFT_02235 - multi-sensor signal transduction histidine kinase, at 378,601 to 381,015 _02235 H281DRAFT_02236: H281DRAFT_02236 - protein of unknown function (DUF4390), at 381,005 to 381,604 _02236
Group Condition H281DRAFT_02232 H281DRAFT_02233 H281DRAFT_02234 H281DRAFT_02235 H281DRAFT_02236
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.3 N.D. N.D. -2.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -3.8 N.D. N.D. -2.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -4.4 N.D. N.D. -1.6 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -4.5 N.D. N.D. -1.0 N.D.
carbon source Phenylacetic (C) -1.0 N.D. N.D. -4.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -3.0 N.D. N.D. -2.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -1.4 N.D. N.D. -3.4 N.D.
carbon source Phenylacetic (C) -0.8 N.D. N.D. -4.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.0 N.D. N.D. -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.0 N.D. N.D. -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.4 N.D. N.D. +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.8 N.D. N.D. -0.3 N.D.
carbon source adipate (C) +0.3 N.D. N.D. -4.3 N.D.
phage Bu1_100 -0.2 N.D. N.D. -3.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.7 N.D. N.D. -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.6 N.D. N.D. +0.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.6 N.D. N.D. +0.0 N.D.
phage Bu1_10 +0.2 N.D. N.D. -3.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.6 N.D. N.D. +0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 N.D. N.D. -2.8 N.D.
control NoPhageControl -0.7 N.D. N.D. -2.4 N.D.
phage Bu1_100 -0.0 N.D. N.D. -3.0 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.8 N.D. N.D. -2.1 N.D.
carbon source Protocatechuic Acid (C) -0.9 N.D. N.D. -2.0 N.D.
carbon source Valeric (C) +0.3 N.D. N.D. -3.1 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 N.D. N.D. -2.9 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.8 N.D. N.D. +0.1 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 N.D. N.D. -2.4 N.D.
carbon source butyrate (C) +0.5 N.D. N.D. -3.0 N.D.
carbon source Hexanoic (C) +0.8 N.D. N.D. -2.2 N.D.
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