Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02189 and H281DRAFT_02190 are separated by 51 nucleotidesH281DRAFT_02190 and H281DRAFT_02191 are separated by 98 nucleotidesH281DRAFT_02191 and H281DRAFT_02192 are separated by 130 nucleotidesH281DRAFT_02192 and H281DRAFT_02193 are separated by 308 nucleotides H281DRAFT_02189: H281DRAFT_02189 - hypothetical protein, at 331,797 to 331,991 _02189 H281DRAFT_02190: H281DRAFT_02190 - Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist, at 332,043 to 333,068 _02190 H281DRAFT_02191: H281DRAFT_02191 - hypothetical protein, at 333,167 to 333,694 _02191 H281DRAFT_02192: H281DRAFT_02192 - MFS transporter, YNFM family, putative membrane transport protein, at 333,825 to 335,030 _02192 H281DRAFT_02193: H281DRAFT_02193 - hypothetical protein, at 335,339 to 335,524 _02193
Group Condition H281DRAFT_02189 H281DRAFT_02190 H281DRAFT_02191 H281DRAFT_02192 H281DRAFT_02193
carbon source 3-Hydroxypropionate (C) N.D. -0.1 -0.4 -0.0 -1.2
carbon source 3-hydroxybutyric (C) N.D. -0.1 -0.1 -0.2 -1.0
carbon source Protocatechuic Acid (C) N.D. -0.1 -0.2 -0.0 -1.1
carbon source 3-Hydroxypropionate (C) N.D. +0.0 -0.5 -0.1 -0.3
carbon source adipate (C) N.D. -0.0 -0.5 -0.5 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.0 +0.2 -0.1 -0.8
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.1 -0.1 +0.2 -0.5
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. -0.0 -0.2 +0.3 -0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.2 -0.2 -0.0 +0.6
carbon source Hexanoic (C) N.D. +0.0 -0.0 -0.3 +0.6
carbon source Malonic (C) N.D. +0.1 -0.1 -0.2 +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.2 -0.1 +0.1 +0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.3 -0.1 -0.0 +1.0
phage Bu1_10 N.D. +0.0 -0.1 +0.1 +0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.2 +0.3 +0.1 +0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.1 +0.2 +0.1 +0.6
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.2 -0.1 -0.0 +0.8
ecofab LB in EcoFAB_3.5mL N.D. +0.1 +0.1 +0.1 +0.6
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. -0.0 +0.1 -0.0 +0.8
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.1 -0.1 +0.2 +0.7
carbon source D-Glucose 20 mM (C) N.D. -0.0 +0.0 -0.0 +0.9
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.0 +0.1 +0.0 +0.8
carbon source Gallic Acid (C) N.D. +0.0 +0.1 +0.0 +0.9
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.0 +0.1 +0.2 +0.8
carbon source D-Glucose 20 mM (C) N.D. +0.1 +0.1 +0.0 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.3 +0.1 +0.3 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.2 +0.2 +0.1 +0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.2 +0.4 -0.1 +0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.1 -0.2 +0.0 +1.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.0 +0.0 +0.2 +1.6
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