Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02135 and H281DRAFT_02136 are separated by 126 nucleotidesH281DRAFT_02136 and H281DRAFT_02137 are separated by 4 nucleotidesH281DRAFT_02137 and H281DRAFT_02138 overlap by 8 nucleotidesH281DRAFT_02138 and H281DRAFT_02139 overlap by 4 nucleotides H281DRAFT_02135: H281DRAFT_02135 - Protein of unknown function (DUF3892), at 273,536 to 273,835 _02135 H281DRAFT_02136: H281DRAFT_02136 - hypothetical protein, at 273,962 to 274,549 _02136 H281DRAFT_02137: H281DRAFT_02137 - type I restriction enzyme M protein, at 274,554 to 276,065 _02137 H281DRAFT_02138: H281DRAFT_02138 - type I restriction enzyme, S subunit, at 276,058 to 277,431 _02138 H281DRAFT_02139: H281DRAFT_02139 - type I restriction enzyme, R subunit, at 277,428 to 280,721 _02139
Group Condition H281DRAFT_02135 H281DRAFT_02136 H281DRAFT_02137 H281DRAFT_02138 H281DRAFT_02139
carbon source adipate (C) -0.6 -5.0 -1.8 -0.0 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -4.1 -2.8 -0.1 -0.2
carbon source succinate (C) -0.2 -5.0 -0.7 -0.1 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -2.5 -2.7 -0.2 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -3.9 -2.1 +0.1 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -2.1 -2.9 -0.2 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -2.6 -2.0 -0.0 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -3.1 -1.8 -0.0 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -2.9 -1.7 +0.0 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -1.8 -2.4 -0.2 -0.2
carbon source Gallic Acid (C) -0.3 -3.0 -1.3 -0.0 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -3.4 -1.3 +0.3 -0.2
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -1.9 -2.2 -0.1 -0.4
carbon source Malonic (C) +0.1 -1.2 -2.3 -0.2 -0.3
carbon source 3-Hydroxypropionate (C) -0.2 -1.0 -2.3 -0.1 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -1.9 -1.6 -0.1 -0.2
carbon source Malonic (C) +0.2 -2.6 -1.0 -0.2 +0.1
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -1.9 -1.4 +0.0 -0.3
control NoPhageControl +0.1 -2.3 -0.8 -0.1 -0.3
carbon source adipate (C) -0.3 -1.7 -1.1 -0.1 -0.1
carbon source butyrate (C) -0.1 -1.7 -1.5 -0.1 +0.0
carbon source 3-Hydroxypropionate (C) +0.1 -1.5 -1.5 -0.1 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.3 -3.1 -0.5 -0.0 +0.1
ecofab LB in EcoFAB_3.5mL +0.5 -1.6 -1.7 -0.0 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.1 -2.2 -0.3 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -1.6 -1.4 +0.1 -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.4 -2.3 -0.1 -0.2
carbon source succinate (C) -0.3 -0.6 -1.8 -0.0 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 -1.0 -1.8 +0.1 -0.2
carbon source L-Glutamic (C) +0.4 -1.7 -1.3 +0.1 +0.0
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