Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02110 and H281DRAFT_02111 are separated by 123 nucleotidesH281DRAFT_02111 and H281DRAFT_02112 are separated by 207 nucleotidesH281DRAFT_02112 and H281DRAFT_02113 are separated by 579 nucleotidesH281DRAFT_02113 and H281DRAFT_02114 are separated by 569 nucleotides H281DRAFT_02110: H281DRAFT_02110 - methylmalonyl-CoA mutase, at 235,224 to 238,622 _02110 H281DRAFT_02111: H281DRAFT_02111 - transcriptional regulator, LysR family, at 238,746 to 239,681 _02111 H281DRAFT_02112: H281DRAFT_02112 - Outer membrane protein (porin), at 239,889 to 240,974 _02112 H281DRAFT_02113: H281DRAFT_02113 - hypothetical protein, at 241,554 to 242,009 _02113 H281DRAFT_02114: H281DRAFT_02114 - solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 242,579 to 243,604 _02114
Group Condition H281DRAFT_02110 H281DRAFT_02111 H281DRAFT_02112 H281DRAFT_02113 H281DRAFT_02114
phage Bu1_10 -0.2 -0.2 +0.0 -0.1 -1.6
phage Bu1_100 -0.3 -0.5 -0.0 -0.1 -1.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 -0.2 -0.6 -0.1 -0.7
carbon source Suberic (C) -0.1 -0.4 -0.0 -0.3 -0.7
carbon source propionate (C) +0.0 -0.5 -0.0 -0.1 -0.9
carbon source D-Glucose (C) -0.1 -0.6 -0.2 -0.1 -0.6
carbon source Malonic (C) +0.1 -0.5 -0.0 -0.1 -0.5
carbon source Pimelic (C) -0.1 -0.0 -0.1 -0.2 -0.7
carbon source 4-Hydroxybenzoic Acid (C) -0.0 +0.4 +0.0 -0.1 -1.2
carbon source Protocatechuic Acid (C) -0.1 -0.1 -0.0 +0.1 -0.8
carbon source Valeric (C) +0.0 -0.1 -0.0 +0.2 -1.0
carbon source butyrate (C) -0.3 -0.2 +0.2 -0.0 -0.6
carbon source adipate (C) +0.1 -0.3 +0.1 -0.4 -0.3
carbon source succinate (C) +0.1 -0.3 +0.2 -0.2 -0.5
carbon source adipate (C) +0.0 -0.6 +0.0 -0.2 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.3 -0.1 +0.3 -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.2 -0.5 -0.0 +0.2 -0.5
carbon source Malonic (C) +0.0 +0.3 -0.1 +0.1 -0.9
carbon source Malonic (C) +0.0 -0.3 +0.2 +0.2 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.0 +0.3 +0.1 -0.3 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.2 +0.1 +0.1 -0.5
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.0 +0.2 +0.1 +0.1 -0.7
carbon source Valeric (C) +0.1 +0.4 +0.0 +0.0 -0.8
carbon source 2'-Deoxyinosine 10 mM (C) +0.0 -0.3 -0.5 +0.3 +0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 +0.2 +0.2 +0.1 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 -0.3 +0.8 +0.0 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.2 +0.1 +0.1 +0.4
ecofab LB in EcoFAB_3.5mL +0.1 +0.0 +0.2 +0.3 +0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.0 -0.0 +0.3 +0.2 +0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 -0.2 +0.9 +0.6 +0.4
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