Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02054 and H281DRAFT_02055 are separated by 334 nucleotidesH281DRAFT_02055 and H281DRAFT_02056 are separated by 8 nucleotidesH281DRAFT_02056 and H281DRAFT_02057 are separated by 180 nucleotidesH281DRAFT_02057 and H281DRAFT_02058 are separated by 31 nucleotides H281DRAFT_02054: H281DRAFT_02054 - penicillin-binding protein 6. Serine peptidase. MEROPS family S11, at 176,886 to 178,115 _02054 H281DRAFT_02055: H281DRAFT_02055 - hypothetical protein, at 178,450 to 179,094 _02055 H281DRAFT_02056: H281DRAFT_02056 - (2Fe-2S) ferredoxin, at 179,103 to 179,426 _02056 H281DRAFT_02057: H281DRAFT_02057 - VanZ like family protein, at 179,607 to 180,770 _02057 H281DRAFT_02058: H281DRAFT_02058 - cholesterol transport system auxiliary component, at 180,802 to 181,443 _02058
Group Condition H281DRAFT_02054 H281DRAFT_02055 H281DRAFT_02056 H281DRAFT_02057 H281DRAFT_02058
phage Bu1_10 -1.4 +0.1 +0.2 -0.0 -1.3
carbon source Azelaic (C) -0.1 -0.5 -0.4 -0.1 -1.1
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.1 +0.2 -0.1 -1.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 +0.1 -0.4 -0.0 -0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.0 -0.7 -0.5 -0.1 -0.6
carbon source Hexanoic (C) -0.9 -0.1 -0.4 -0.1 -0.3
carbon source propionate (C) -0.5 +0.2 -0.6 -0.1 -0.6
carbon source Phenylacetic (C) +0.9 +0.1 -0.5 -0.0 -1.9
phage Bu1_100 -1.3 +0.1 +0.5 -0.1 -0.7
carbon source D-Glucose (C) +0.2 -0.3 -0.3 -0.2 -0.6
carbon source adipate (C) -0.7 -0.1 -0.4 -0.3 +0.3
carbon source Malonic (C) -0.3 +0.1 -1.0 +0.0 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 -0.5 +0.3 -0.2 -0.7
carbon source Malonic (C) -0.3 -0.2 -0.9 -0.1 +0.6
carbon source p-Coumaric (C) +0.2 +0.0 +0.2 +0.0 -1.2
carbon source 2'-Deoxyinosine 10 mM (C) +0.6 -0.4 +0.1 +0.1 -0.8
phage Bu1_100 -1.7 -0.1 +0.3 +0.2 +0.9
carbon source D-Glucose 20 mM (C) +0.3 -0.8 -0.3 +0.0 +0.3
carbon source 4-Hydroxybenzoic Acid (C) +1.3 -0.5 -0.5 -0.1 -0.3
carbon source Phenylacetic (C) +1.0 +0.1 +0.1 -0.1 -1.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.7 -0.2 +0.1 +0.2 -0.7
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.5 +0.1 +0.2 -0.4 +0.7
carbon source D,L-Lactate (C) +0.2 -0.5 -0.2 +0.1 +0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.6 -0.6 -0.2 +0.1 +0.8
carbon source Hexanoic (C) -0.2 -0.5 +0.4 +0.2 +1.0
carbon source 2'-Deoxyinosine 10 mM (C) +0.7 -0.6 -0.1 -0.0 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.3 -0.2 -0.0 +1.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.6 -0.4 +0.0 -0.1 +0.8
carbon source D-Glucose (C) +0.2 -0.1 -0.4 +0.1 +1.4
carbon source 2'-Deoxyinosine 5 mM (C) +0.6 +0.1 +0.3 -0.0 +0.9
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