Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02044 and H281DRAFT_02045 are separated by 317 nucleotidesH281DRAFT_02045 and H281DRAFT_02046 are separated by 29 nucleotidesH281DRAFT_02046 and H281DRAFT_02047 are separated by 207 nucleotidesH281DRAFT_02047 and H281DRAFT_02048 are separated by 213 nucleotides H281DRAFT_02044: H281DRAFT_02044 - glycerophosphoryl diester phosphodiesterase, at 167,796 to 168,560 _02044 H281DRAFT_02045: H281DRAFT_02045 - transcriptional regulator, DeoR family, at 168,878 to 169,648 _02045 H281DRAFT_02046: H281DRAFT_02046 - phosphate:Na+ symporter, at 169,678 to 171,345 _02046 H281DRAFT_02047: H281DRAFT_02047 - HAD-superfamily subfamily IB hydrolase, TIGR01490, at 171,553 to 172,236 _02047 H281DRAFT_02048: H281DRAFT_02048 - lipoic acid synthetase, at 172,450 to 173,457 _02048
Group Condition H281DRAFT_02044 H281DRAFT_02045 H281DRAFT_02046 H281DRAFT_02047 H281DRAFT_02048
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -2.0 +0.1 -0.3 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 -0.8 -0.1 -0.7 N.D.
carbon source D-Glucose (C) -0.4 -0.0 -1.0 -0.0 N.D.
carbon source D-Glucose (C) -0.3 -0.3 -0.6 -0.1 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.4 -0.1 -0.7 -0.1 N.D.
carbon source Hydroxy-L-Proline (C) -0.4 -0.3 -0.4 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.3 +0.0 -0.3 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -0.4 -0.0 -0.3 N.D.
carbon source Sebacic (C) -0.1 -0.2 -0.6 -0.3 N.D.
phage Bu1_100 -0.8 -0.4 +0.2 -0.1 N.D.
carbon source Malonic (C) -0.5 -0.1 -0.0 -0.4 N.D.
carbon source Phenylacetic (C) -0.0 -0.7 +0.0 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.2 -0.2 -0.6 N.D.
carbon source Phenylacetic (C) -0.5 -0.6 +0.1 +0.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 +0.1 -0.6 -0.0 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.4 +0.2 -0.1 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 +0.3 -0.2 -0.4 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.0 -0.6 -0.2 +0.3 N.D.
control NoPhageControl -0.3 -0.3 +0.3 -0.2 N.D.
carbon source Azelaic (C) +0.3 -0.6 -0.3 +0.1 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.3 -0.2 -0.2 +0.4 N.D.
carbon source succinate (C) -0.2 +0.3 -0.5 +0.1 N.D.
carbon source butyrate (C) -0.5 +0.4 +0.1 -0.1 N.D.
phage Bu1_10 +0.3 -0.5 -0.0 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.2 +0.1 -0.5 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.3 -0.4 +0.1 +0.3 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 -0.0 +0.3 -0.4 N.D.
phage Bu1_100 +0.3 -0.3 +0.3 +0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 +0.8 +0.2 -0.1 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.7 +0.3 +0.2 +0.1 N.D.
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