Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02031 and H281DRAFT_02032 are separated by 9 nucleotidesH281DRAFT_02032 and H281DRAFT_02033 overlap by 4 nucleotidesH281DRAFT_02033 and H281DRAFT_02034 are separated by 76 nucleotidesH281DRAFT_02034 and H281DRAFT_02035 are separated by 331 nucleotides H281DRAFT_02031: H281DRAFT_02031 - hypothetical protein, at 151,543 to 152,898 _02031 H281DRAFT_02032: H281DRAFT_02032 - hypothetical protein, at 152,908 to 154,626 _02032 H281DRAFT_02033: H281DRAFT_02033 - Site-specific recombinase XerD, at 154,623 to 155,819 _02033 H281DRAFT_02034: H281DRAFT_02034 - Predicted ATPase with chaperone activity, at 155,896 to 156,495 _02034 H281DRAFT_02035: H281DRAFT_02035 - hypothetical protein, at 156,827 to 157,534 _02035
Group Condition H281DRAFT_02031 H281DRAFT_02032 H281DRAFT_02033 H281DRAFT_02034 H281DRAFT_02035
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -0.0 +0.3 -0.1 -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.1 -0.0 -0.1 -0.7
phage Bu1_10 -0.1 +0.1 -0.0 -0.3 -0.1
carbon source Sebacic (C) -0.1 +0.1 -0.0 -0.5 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.0 +0.1 -0.1 -0.4
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.0 -0.1 +0.1 -0.4 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 +0.1 +0.3 -0.1 -0.5
carbon source 3-hydroxybutyric (C) +0.1 +0.0 +0.0 -0.5 +0.2
carbon source butyrate (C) -0.0 -0.2 +0.1 -0.2 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.0 +0.0 +0.3 -0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 -0.1 +0.1 -0.4 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +0.0 +0.1 +0.3 -0.5
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.1 -0.0 +0.2 -0.3 +0.1
carbon source 2'-Deoxyinosine 5 mM (C) -0.0 -0.1 +0.2 -0.3 +0.3
carbon source adipate (C) +0.2 -0.1 -0.2 +0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.0 +0.2 +0.0 -0.3 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.1 +0.1 +0.1 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.0 +0.1 +0.2 -0.3 +0.4
carbon source 2'-Deoxyinosine 10 mM (C) +0.1 +0.0 +0.1 -0.5 +0.5
carbon source Phenylacetic (C) +0.0 +0.0 -0.0 -0.1 +0.6
carbon source 4-Hydroxybenzoic Acid (C) +0.0 -0.2 +0.0 +0.1 +0.6
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.1 +0.1 -0.0 +0.4 -0.1
carbon source Malonic (C) +0.1 -0.1 +0.0 +0.2 +0.2
carbon source butyrate (C) -0.0 +0.1 +0.2 +0.0 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.0 -0.0 +0.1 +0.1 +0.4
carbon source Phenylacetic (C) +0.1 +0.1 +0.0 -0.1 +0.6
carbon source 4-Methyl-2-oxopentanoic (C) -0.0 +0.0 +0.1 +0.2 +0.3
carbon source Azelaic (C) +0.0 +0.0 +0.2 +0.3 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 -0.0 +0.2 +0.2 +0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 +0.1 +0.2 +0.1 +0.2
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H281DRAFT_02031
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H281DRAFT_02032
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H281DRAFT_02034
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H281DRAFT_02035
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