Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

Group	Condition	H281DRAFT_02025	H281DRAFT_02026	H281DRAFT_02027	H281DRAFT_02028	H281DRAFT_02029
phage	Bu1_10	-0.7	-0.1	-0.3	-0.1	-0.6
carbon source	propionate (C)	+0.1	-0.2	-0.4	-0.0	-0.5
carbon source	acetate (C)	-0.4	+0.1	-0.2	+0.1	-0.6
carbon source	Sebacic (C)	-0.5	-0.1	-0.2	-0.0	-0.2
carbon source	propionate (C)	+0.1	-0.1	-0.3	+0.0	-0.5
carbon source	D,L-Lactate (C)	-0.3	-0.1	-0.3	-0.0	-0.2
carbon source	2'-Deoxyinosine 5 mM (C)	-0.3	+0.2	-0.1	-0.0	-0.6
carbon source	Malonic (C)	-0.3	+0.0	-0.1	+0.1	-0.7
carbon source	D-Glucose 20 mM (C)	-0.5	+0.0	-0.3	-0.0	+0.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.3	+0.2	-0.3	-0.1	-0.1
carbon source	adipate (C)	+0.2	+0.0	+0.0	-0.3	-0.5
carbon source	Dodecandioic (C)	-0.3	-0.0	+0.2	-0.1	-0.3
carbon source	3-hydroxybutyric (C)	-0.1	+0.1	-0.4	+0.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	-0.2	+0.0	+0.2	-0.5
carbon source	butyrate (C)	+0.2	-0.1	-0.0	+0.2	-0.6
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.3	-0.0	-0.3	+0.2	+0.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.2	+0.1	-0.3	+0.1	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.2	+0.1	-0.5	+0.1	+0.3
carbon source	4-Hydroxybenzoic Acid (C)	+0.5	-0.2	-0.1	+0.0	-0.3
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.3	-0.0	+0.2	-0.0	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	-0.1	+0.1	-0.2	+0.2	+0.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.5	+0.1	-0.1	-0.0	+0.8
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	+0.2	+0.1	-0.2	+0.0	+0.4
carbon source	adipate (C)	+0.8	-0.1	-0.1	+0.2	-0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	-0.3	+0.4	-0.2	+0.2	+0.5
ecofab	LB in EcoFAB_3.5mL	+0.5	+0.2	-0.1	+0.0	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2	-0.1	+0.2	+0.2	+0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.1	-0.0	-0.1	-0.0	+0.8
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.3	+0.1	-0.0	+0.0	+0.4
carbon source	D-Glucose (C)	+0.2	+0.2	+0.1	+0.1	+0.5