Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_02008 and H281DRAFT_02009 are separated by 80 nucleotidesH281DRAFT_02009 and H281DRAFT_02010 are separated by 341 nucleotidesH281DRAFT_02010 and H281DRAFT_02011 are separated by 165 nucleotidesH281DRAFT_02011 and H281DRAFT_02012 are separated by 247 nucleotides H281DRAFT_02008: H281DRAFT_02008 - phosphocarrier protein, at 125,916 to 126,185 _02008 H281DRAFT_02009: H281DRAFT_02009 - PTS system, ascorbate-specific IIA component, at 126,266 to 126,754 _02009 H281DRAFT_02010: H281DRAFT_02010 - glutathione synthase, at 127,096 to 128,052 _02010 H281DRAFT_02011: H281DRAFT_02011 - glutamate--cysteine ligase, at 128,218 to 129,507 _02011 H281DRAFT_02012: H281DRAFT_02012 - ammonium transporter, at 129,755 to 131,248 _02012
Group Condition H281DRAFT_02008 H281DRAFT_02009 H281DRAFT_02010 H281DRAFT_02011 H281DRAFT_02012
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.9 N.D. -1.1 -1.0 -0.0
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.8 N.D. -1.1 -0.9 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.0 N.D. -1.2 -1.0 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt (C) -3.2 N.D. -0.6 +0.1 -0.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) -3.5 N.D. -0.4 +0.1 +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -3.1 N.D. -0.2 -0.2 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -3.4 N.D. -0.2 +0.1 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.4 N.D. -1.2 -0.5 +0.0
carbon source p-Coumaric (C) -2.1 N.D. -0.7 -0.3 +0.0
carbon source Hexanoic (C) -2.1 N.D. -1.0 +0.2 -0.0
carbon source D-Glucose (C) -2.7 N.D. -0.0 -0.1 -0.1
carbon source p-Coumaric (C) -1.9 N.D. -0.7 -0.2 -0.1
carbon source D-Glucose (C) -2.4 N.D. -0.2 -0.1 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.2 N.D. -1.1 -0.4 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 N.D. -0.7 -0.6 +0.2
carbon source 4-Methyl-2-oxopentanoic (C) -2.3 N.D. -0.2 -0.0 -0.1
carbon source Hexanoic (C) -1.9 N.D. -1.0 +0.2 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 N.D. -0.5 -0.7 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -2.0 N.D. -0.4 +0.2 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -2.6 N.D. +0.1 +0.1 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -2.0 N.D. -0.4 +0.1 -0.1
carbon source 4-Methyl-2-oxopentanoic (C) -2.2 N.D. -0.1 -0.1 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -3.1 N.D. +2.8 +0.4 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.8 N.D. +2.6 +0.1 +0.1
carbon source Azelaic (C) +2.1 N.D. -0.3 -0.2 +0.0
carbon source L-Glutamic (C) +2.7 N.D. -0.2 -0.3 -0.0
carbon source D-Glucose (C) +2.3 N.D. +0.1 -0.2 +0.2
carbon source Dodecandioic (C) +2.9 N.D. -0.7 +0.1 +0.2
carbon source Hydroxy-L-Proline (C) +3.3 N.D. -0.2 -0.2 -0.0
carbon source L-Glutamic (C) +3.3 N.D. -0.1 +0.0 +0.0
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