Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01999 and H281DRAFT_02000 are separated by 114 nucleotidesH281DRAFT_02000 and H281DRAFT_02001 are separated by 21 nucleotidesH281DRAFT_02001 and H281DRAFT_02002 are separated by 150 nucleotidesH281DRAFT_02002 and H281DRAFT_02003 overlap by 4 nucleotides H281DRAFT_01999: H281DRAFT_01999 - O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain, at 117,188 to 117,736 _01999 H281DRAFT_02000: H281DRAFT_02000 - glycerol-3-phosphate dehydrogenase (NAD(P)+), at 117,851 to 118,849 _02000 H281DRAFT_02001: H281DRAFT_02001 - protein translocase subunit secB, at 118,871 to 119,341 _02001 H281DRAFT_02002: H281DRAFT_02002 - glutaredoxin 3, at 119,492 to 119,752 _02002 H281DRAFT_02003: H281DRAFT_02003 - Rhodanese-related sulfurtransferase, at 119,749 to 120,222 _02003
Group Condition H281DRAFT_01999 H281DRAFT_02000 H281DRAFT_02001 H281DRAFT_02002 H281DRAFT_02003
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -4.7 -2.0 N.D. -1.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 -4.3 -1.8 N.D. -1.4
carbon source Protocatechuic Acid (C) -0.6 -5.0 -2.0 N.D. +0.3
carbon source D,L-Lactate (C) +0.1 -5.5 -1.4 N.D. -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 -4.1 -1.9 N.D. -0.9
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -5.3 -1.7 N.D. +0.0
carbon source D,L-Lactate (C) +0.1 -5.1 -1.4 N.D. -0.2
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -3.4 -2.0 N.D. -1.0
carbon source Phenylacetic (C) -0.1 -6.3 -0.2 N.D. +0.5
carbon source Protocatechuic Acid (C) -0.3 -3.7 -1.6 N.D. -0.4
carbon source succinate (C) -0.6 -3.0 -1.7 N.D. -0.7
carbon source Gallic Acid (C) +0.1 -4.7 -0.9 N.D. -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.7 -3.4 -2.2 N.D. -0.8
carbon source D,L-Lactate (C) -0.2 -4.1 -1.0 N.D. -0.3
carbon source Protocatechuic Acid (C) +0.1 -4.3 -1.1 N.D. -0.1
carbon source D,L-Lactate (C) -0.0 -3.9 -0.9 N.D. -0.4
carbon source Hydroxy-L-Proline (C) +0.1 -4.5 -0.9 N.D. +0.1
carbon source D-Galactose (C) +0.1 -4.6 -0.3 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -2.8 -1.4 N.D. -0.9
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -3.4 -1.5 N.D. -0.3
carbon source L-Glutamic (C) +0.1 -4.5 -0.2 N.D. -0.5
carbon source Gallic Acid (C) +0.0 -4.1 -0.2 N.D. -0.7
carbon source propionate (C) -0.3 -3.6 +0.0 N.D. -1.0
carbon source 2-furoic (C) -0.2 -4.2 -0.4 N.D. -0.0
carbon source 3-Hydroxypropionate (C) -0.3 -4.7 +0.4 N.D. -0.2
carbon source Protocatechuic Acid (C) +0.5 -4.4 -0.5 N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -2.8 -1.6 N.D. -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.6 -3.1 -0.6 N.D. -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -2.3 -1.4 N.D. -0.7
carbon source butyrate (C) -0.6 -3.8 +0.3 N.D. +0.4
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