Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01938 and H281DRAFT_01939 are separated by 47 nucleotidesH281DRAFT_01939 and H281DRAFT_01940 are separated by 163 nucleotidesH281DRAFT_01940 and H281DRAFT_01941 are separated by 149 nucleotidesH281DRAFT_01941 and H281DRAFT_01942 are separated by 114 nucleotides H281DRAFT_01938: H281DRAFT_01938 - tRNA_Gln_TTG, at 55,362 to 55,438 _01938 H281DRAFT_01939: H281DRAFT_01939 - ribose-phosphate pyrophosphokinase, at 55,486 to 56,442 _01939 H281DRAFT_01940: H281DRAFT_01940 - LSU ribosomal protein L25P, at 56,606 to 57,223 _01940 H281DRAFT_01941: H281DRAFT_01941 - peptidyl-tRNA hydrolase, at 57,373 to 57,975 _01941 H281DRAFT_01942: H281DRAFT_01942 - histidinol-phosphate aminotransferase, at 58,090 to 59,169 _01942
Group Condition H281DRAFT_01938 H281DRAFT_01939 H281DRAFT_01940 H281DRAFT_01941 H281DRAFT_01942
carbon source p-Coumaric (C) N.D. N.D. N.D. N.D. -0.9
carbon source p-Coumaric (C) N.D. N.D. N.D. N.D. -0.7
phage Bu1_100 N.D. N.D. N.D. N.D. -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. N.D. N.D. -0.2
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. +0.2
carbon source Hexanoic (C) N.D. N.D. N.D. N.D. +0.2
carbon source Dodecandioic (C) N.D. N.D. N.D. N.D. +0.2
carbon source Phenylacetic (C) N.D. N.D. N.D. N.D. +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. N.D. N.D. +0.2
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. N.D. N.D. +0.2
carbon source butyrate (C) N.D. N.D. N.D. N.D. +0.2
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. +0.2
carbon source adipate (C) N.D. N.D. N.D. N.D. +0.2
carbon source 4-Methyl-2-oxopentanoic (C) N.D. N.D. N.D. N.D. +0.2
carbon source Malonic (C) N.D. N.D. N.D. N.D. +0.2
carbon source Gallic Acid (C) N.D. N.D. N.D. N.D. +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. N.D. N.D. +0.2
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. N.D. N.D. +0.2
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. N.D. N.D. +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. N.D. N.D. +0.2
carbon source Valeric (C) N.D. N.D. N.D. N.D. +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. N.D. N.D. +0.2
carbon source succinate (C) N.D. N.D. N.D. N.D. +0.2
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. +0.3
carbon source Azelaic (C) N.D. N.D. N.D. N.D. +0.3
carbon source acetate (C) N.D. N.D. N.D. N.D. +0.3
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