Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01912 and H281DRAFT_01913 are separated by 320 nucleotidesH281DRAFT_01913 and H281DRAFT_01914 are separated by 33 nucleotidesH281DRAFT_01914 and H281DRAFT_01915 are separated by 58 nucleotidesH281DRAFT_01915 and H281DRAFT_01916 are separated by 384 nucleotides H281DRAFT_01912: H281DRAFT_01912 - Predicted arabinose efflux permease, MFS family, at 25,471 to 26,736 _01912 H281DRAFT_01913: H281DRAFT_01913 - Excinuclease ABC subunit A, at 27,057 to 29,930 _01913 H281DRAFT_01914: H281DRAFT_01914 - Predicted PurR-regulated permease PerM, at 29,964 to 31,049 _01914 H281DRAFT_01915: H281DRAFT_01915 - iron complex outermembrane recepter protein, at 31,108 to 33,231 _01915 H281DRAFT_01916: H281DRAFT_01916 - Uncharacterized iron-regulated membrane protein, at 33,616 to 34,881 _01916
Group Condition H281DRAFT_01912 H281DRAFT_01913 H281DRAFT_01914 H281DRAFT_01915 H281DRAFT_01916
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.2 -2.6 +0.3 -0.5
carbon source succinate (C) N.D. -0.0 -2.9 +0.0 +0.1
carbon source succinate (C) N.D. -0.0 -2.6 +0.1 -0.2
phage Bu1_100 N.D. -0.4 -1.7 +0.0 -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.1 -1.3 +0.1 -0.4
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.2 -1.4 -0.1 +0.0
phage Bu1_10 N.D. -0.4 -0.8 -0.1 -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.2 -1.5 +0.0 +0.1
phage Bu1_100 N.D. -0.5 -1.0 -0.1 +0.1
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.2 -1.3 -0.1 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.1 -1.2 +0.1 -0.2
carbon source Hexanoic (C) N.D. +0.3 -1.8 +0.1 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.2 -1.1 -0.0 +0.0
carbon source Dodecandioic (C) N.D. -0.0 -1.2 +0.1 +0.0
carbon source propionate (C) N.D. -0.2 -1.2 +0.1 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. -0.2 -1.0 +0.1 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.2 -1.0 +0.1 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -0.1 -1.1 +0.2 +0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.2 -1.3 +0.4 +0.2
ecofab LB in EcoFAB_3.5mL N.D. +0.1 -1.3 +0.1 +0.2
carbon source Valeric (C) N.D. +0.1 -1.2 +0.1 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.1 -1.2 +0.1 +0.2
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.2 -0.9 +0.1 +0.3
carbon source Hexanoic (C) N.D. +0.1 -1.0 +0.2 +0.5
carbon source Malonic (C) N.D. +0.4 +0.9 +0.1 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.4 +1.5 +0.0 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.6 +1.7 -0.0 +0.1
carbon source Phenylacetic (C) N.D. +0.1 +2.4 -0.0 -0.1
carbon source Phenylacetic (C) N.D. +0.1 +2.5 -0.0 +0.2
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.1 +3.9 +0.0 +0.0
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