Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01907 and H281DRAFT_01908 overlap by 4 nucleotidesH281DRAFT_01908 and H281DRAFT_01909 are separated by 167 nucleotidesH281DRAFT_01909 and H281DRAFT_01910 are separated by 305 nucleotidesH281DRAFT_01910 and H281DRAFT_01911 are separated by 67 nucleotides H281DRAFT_01907: H281DRAFT_01907 - cytochrome c oxidase subunit 1, at 19,338 to 20,963 _01907 H281DRAFT_01908: H281DRAFT_01908 - Cytochrome c553, at 20,960 to 21,769 _01908 H281DRAFT_01909: H281DRAFT_01909 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 21,937 to 23,589 _01909 H281DRAFT_01910: H281DRAFT_01910 - hypothetical protein, at 23,895 to 24,695 _01910 H281DRAFT_01911: H281DRAFT_01911 - single-strand binding protein, at 24,763 to 25,302 _01911
Group Condition H281DRAFT_01907 H281DRAFT_01908 H281DRAFT_01909 H281DRAFT_01910 H281DRAFT_01911
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 -0.1 -1.0 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.1 -1.0 +0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.4 -1.0 +0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.2 -0.9 +0.1 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 -0.5 +0.0 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.0 -0.9 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.0 -0.9 +0.2 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 +0.1 -0.3 -0.4 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.1 -0.6 -0.0 +0.1 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.1 -0.2 -0.1 -0.2 N.D.
carbon source Protocatechuic Acid (C) -0.0 -0.3 +0.1 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 +0.6 -0.9 -0.1 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.2 -0.3 +0.1 -0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 +0.7 -0.7 -0.0 N.D.
control NoPhageControl +0.2 -0.4 +0.2 +0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 -0.2 +0.5 -0.2 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.1 +0.1 +0.3 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.4 -0.5 +0.2 N.D.
carbon source D-Glucose (C) -0.0 -0.2 +0.3 +0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 +0.4 +0.1 -0.2 N.D.
carbon source Phenylacetic (C) +0.1 +0.3 -0.2 +0.1 N.D.
carbon source butyrate (C) +0.3 +0.3 +0.1 -0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.2 +0.4 -0.0 -0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 +0.3 +0.3 -0.3 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 +0.5 +0.2 -0.1 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 +0.4 +0.2 -0.0 N.D.
carbon source Gallic Acid (C) +0.2 +0.2 +0.1 +0.2 N.D.
carbon source Hexanoic (C) +0.1 +0.7 +0.2 -0.2 N.D.
carbon source Azelaic (C) +0.1 +0.6 +0.3 -0.1 N.D.
carbon source Malonic (C) +0.2 +0.7 +0.2 -0.0 N.D.
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