Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01880 and H281DRAFT_01881 overlap by 4 nucleotidesH281DRAFT_01881 and H281DRAFT_01882 are separated by 956 nucleotidesH281DRAFT_01882 and H281DRAFT_01883 are separated by 814 nucleotidesH281DRAFT_01883 and H281DRAFT_01884 overlap by 4 nucleotides H281DRAFT_01880: H281DRAFT_01880 - two component transcriptional regulator, LuxR family, at 797,218 to 797,877 _01880 H281DRAFT_01881: H281DRAFT_01881 - two-component system, LuxR family, sensor kinase FixL, at 797,874 to 799,334 _01881 H281DRAFT_01882: H281DRAFT_01882 - Lipid-binding SYLF domain-containing protein, at 800,291 to 800,878 _01882 H281DRAFT_01883: H281DRAFT_01883 - putative addiction module antidote protein, CC2985 family, at 801,693 to 801,926 _01883 H281DRAFT_01884: H281DRAFT_01884 - two-component system, chemotaxis family, CheB/CheR fusion protein, at 801,923 to 805,099 _01884
Group Condition H281DRAFT_01880 H281DRAFT_01881 H281DRAFT_01882 H281DRAFT_01883 H281DRAFT_01884
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.8 +0.1 -0.8 -4.9 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 +0.0 -0.4 -4.3 -0.0
carbon source butyrate (C) +0.3 +0.9 -0.8 -4.3 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.8 -0.0 -0.2 -1.9 -0.0
carbon source Dodecandioic (C) +0.3 +0.1 -0.2 -3.1 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 -0.8 -0.3 -1.5 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.1 -0.2 -0.3 -2.0 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.7 -0.8 +0.5 -1.8 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -1.1 -0.8 -0.2 -0.5 -0.1
carbon source D-Glucose (C) -0.4 -0.5 +0.1 -1.6 -0.1
carbon source Protocatechuic Acid (C) -0.2 -0.5 -0.4 -1.0 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.2 +0.2 -0.4 -0.6 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.5 -0.0 -0.2 -1.3 +0.2
carbon source acetate (C) -0.3 +0.2 -0.4 -1.1 -0.1
carbon source D-Glucose (C) +0.4 -0.2 -0.5 -1.2 -0.0
ecofab LB in EcoFAB_3.5mL -0.1 -0.5 +0.3 -1.0 -0.1
carbon source butyrate (C) +0.3 -0.7 -0.3 -0.7 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.4 -0.3 -1.0 +0.2
carbon source Malonic (C) +0.4 +0.1 -0.1 -1.6 +0.0
carbon source 2-Deoxy-D-Ribose (C) +0.5 -0.6 +0.1 -1.0 -0.1
phage Bu1_100 +0.9 -0.6 -0.2 -1.1 +0.1
carbon source Sebacic (C) -1.1 +0.5 -0.5 +0.4 -0.1
carbon source D-Glucose 20 mM (C) -0.2 +0.6 +0.5 -1.4 -0.1
phage Bu1_100 +0.2 -0.6 -0.6 +0.5 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +0.6 -0.9 -0.4 -0.1
carbon source Hexanoic (C) +0.8 +0.4 -1.0 +0.0 -0.1
carbon source Hexanoic (C) -0.7 -0.2 +0.4 +1.0 +0.1
carbon source Protocatechuic Acid (C) +0.4 +1.0 -0.5 +0.1 -0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.9 +0.4 +0.4 -0.7 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.9 +0.7 +0.2 +0.6 +0.1
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