Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01864 and H281DRAFT_01865 overlap by 14 nucleotidesH281DRAFT_01865 and H281DRAFT_01866 are separated by 19 nucleotidesH281DRAFT_01866 and H281DRAFT_01867 are separated by 10 nucleotidesH281DRAFT_01867 and H281DRAFT_01868 are separated by 67 nucleotides H281DRAFT_01864: H281DRAFT_01864 - Predicted dithiol-disulfide isomerase, DsbA family, at 777,612 to 778,346 _01864 H281DRAFT_01865: H281DRAFT_01865 - hypothetical protein, at 778,333 to 778,893 _01865 H281DRAFT_01866: H281DRAFT_01866 - taurine dioxygenase, at 778,913 to 779,761 _01866 H281DRAFT_01867: H281DRAFT_01867 - NADPH2:quinone reductase, at 779,772 to 780,752 _01867 H281DRAFT_01868: H281DRAFT_01868 - Predicted arabinose efflux permease, MFS family, at 780,820 to 782,142 _01868
Group Condition H281DRAFT_01864 H281DRAFT_01865 H281DRAFT_01866 H281DRAFT_01867 H281DRAFT_01868
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -1.6 +0.0 -0.2 -0.5
carbon source Phenylacetic (C) N.D. -0.5 -0.7 -0.3 -0.7
phage Bu1_100 N.D. -0.8 -0.1 -0.3 -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.7 +0.1 -0.6 -0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.0 -0.1 -0.7 -0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.9 -0.3 -0.4 -0.1
ecofab LB in EcoFAB_3.5mL N.D. -1.1 +0.2 -0.4 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.7 -0.7 -0.2 +0.0
carbon source Phenylacetic (C) N.D. +0.0 -0.7 -0.1 -0.6
carbon source Gallic Acid (C) N.D. -1.2 -0.2 +0.4 -0.5
carbon source Hydroxy-L-Proline (C) N.D. -1.0 -0.2 -0.3 +0.2
carbon source D-Glucose (C) N.D. -0.4 +0.1 -0.9 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -1.1 -0.1 +0.2 -0.1
carbon source Valeric (C) N.D. -1.2 +0.3 +0.0 -0.1
carbon source D,L-Lactate (C) N.D. -0.7 -0.0 +0.3 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 -0.5 +0.0 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -0.6 -0.4 +0.4 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.3 -0.3 +0.6 -0.6
carbon source Dodecandioic (C) N.D. -1.0 +0.5 +0.2 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.4 +0.2 +0.3 -0.5
carbon source 2-Deoxy-D-Ribose (C) N.D. -1.0 +0.1 +0.2 +0.3
carbon source propionate (C) N.D. -0.9 +0.4 +0.2 +0.0
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.9 +0.2 +0.4 +0.2
carbon source D-Glucose (C) N.D. +0.5 -0.1 -0.6 +0.2
carbon source Malonic (C) N.D. -0.8 +0.4 -0.0 +0.4
carbon source Sebacic (C) N.D. -0.8 +0.8 +0.1 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.3 +0.0 +0.7 -0.5
carbon source Valeric (C) N.D. +0.3 +0.3 +0.7 +0.1
carbon source Hexanoic (C) N.D. -1.1 +1.2 +1.3 +2.0
carbon source Hexanoic (C) N.D. +0.1 +1.1 +1.1 +2.0
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