Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01857 and H281DRAFT_01858 are separated by 288 nucleotidesH281DRAFT_01858 and H281DRAFT_01859 are separated by 128 nucleotidesH281DRAFT_01859 and H281DRAFT_01860 are separated by 297 nucleotidesH281DRAFT_01860 and H281DRAFT_01861 are separated by 123 nucleotides H281DRAFT_01857: H281DRAFT_01857 - hypothetical protein, at 771,214 to 771,471 _01857 H281DRAFT_01858: H281DRAFT_01858 - hypothetical protein, at 771,760 to 772,068 _01858 H281DRAFT_01859: H281DRAFT_01859 - Protein of unknown function (DUF3300), at 772,197 to 773,582 _01859 H281DRAFT_01860: H281DRAFT_01860 - hypothetical protein, at 773,880 to 774,137 _01860 H281DRAFT_01861: H281DRAFT_01861 - Predicted periplasmic or secreted lipoprotein, at 774,261 to 774,638 _01861
Group Condition H281DRAFT_01857 H281DRAFT_01858 H281DRAFT_01859 H281DRAFT_01860 H281DRAFT_01861
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. -0.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. -0.8 N.D. N.D.
carbon source Hexanoic (C) N.D. N.D. -0.8 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.7 N.D. N.D.
carbon source D-Glucose (C) N.D. N.D. -0.7 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. -0.7 N.D. N.D.
carbon source propionate (C) N.D. N.D. -0.7 N.D. N.D.
carbon source Malonic (C) N.D. N.D. -0.7 N.D. N.D.
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.6 N.D. N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. -0.6 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. -0.6 N.D. N.D.
carbon source D-Galactose (C) N.D. N.D. -0.5 N.D. N.D.
carbon source adipate (C) N.D. N.D. -0.5 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. -0.5 N.D. N.D.
carbon source Azelaic (C) N.D. N.D. -0.5 N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. -0.5 N.D. N.D.
phage Bu1_10 N.D. N.D. -0.5 N.D. N.D.
carbon source Sebacic (C) N.D. N.D. -0.5 N.D. N.D.
carbon source D-Glucose (C) N.D. N.D. -0.5 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. -0.5 N.D. N.D.
carbon source D-Glucose (C) N.D. N.D. -0.4 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. -0.4 N.D. N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. -0.4 N.D. N.D.
carbon source butyrate (C) N.D. N.D. -0.4 N.D. N.D.
phage Bu1_100 N.D. N.D. +0.5 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +0.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.6 N.D. N.D.
carbon source Valeric (C) N.D. N.D. +0.7 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.8 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +1.0 N.D. N.D.
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