Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01816 and H281DRAFT_01817 are separated by 204 nucleotidesH281DRAFT_01817 and H281DRAFT_01818 are separated by 34 nucleotidesH281DRAFT_01818 and H281DRAFT_01819 are separated by 352 nucleotidesH281DRAFT_01819 and H281DRAFT_01820 are separated by 190 nucleotides H281DRAFT_01816: H281DRAFT_01816 - Uncharacterized protein, contains GYD domain, at 716,630 to 716,923 _01816 H281DRAFT_01817: H281DRAFT_01817 - Hemolysin activation/secretion protein, at 717,128 to 718,867 _01817 H281DRAFT_01818: H281DRAFT_01818 - filamentous hemagglutinin family N-terminal domain-containing protein, at 718,902 to 721,166 _01818 H281DRAFT_01819: H281DRAFT_01819 - PAS domain S-box-containing protein, at 721,519 to 724,167 _01819 H281DRAFT_01820: H281DRAFT_01820 - microcin C transport system substrate-binding protein, at 724,358 to 726,223 _01820
Group Condition H281DRAFT_01816 H281DRAFT_01817 H281DRAFT_01818 H281DRAFT_01819 H281DRAFT_01820
carbon source butyrate (C) N.D. -0.4 -0.2 -0.6 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.0 -0.1 -0.5 -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.1 -0.5 -0.2 -0.1
carbon source acetate (C) N.D. -0.3 -0.4 +0.0 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.1 -0.3 +0.0 -0.3
carbon source Malonic (C) N.D. -0.5 -0.2 +0.3 -0.4
carbon source D-Glucose (C) N.D. -0.3 -0.2 +0.1 -0.2
phage Bu1_10 N.D. -0.3 +0.3 -0.5 -0.1
carbon source 2-furoic (C) N.D. -0.4 -0.3 +0.2 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.4 +0.2 -0.2 -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.2 -0.1 -0.5 -0.1
phage Bu1_100 N.D. +0.1 +0.3 -0.7 -0.1
carbon source Valeric (C) N.D. +0.2 -0.3 +0.0 -0.4
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.3 +0.0 +0.4 -0.5
carbon source L-Glutamic (C) N.D. -0.5 -0.4 +0.7 -0.1
carbon source Malonic (C) N.D. -0.3 -0.4 +0.5 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.1 +0.3 -0.3 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.0 +0.4 -0.5 -0.2
carbon source L-Glutamic (C) N.D. -0.1 -0.4 +0.3 -0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.2 -0.1 +0.4 -0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.2 +0.7 -0.5 -0.1
carbon source Phenylacetic (C) N.D. -0.2 +0.5 -0.2 +0.0
carbon source D-Galactose (C) N.D. -0.1 -0.3 +0.4 +0.0
carbon source succinate (C) N.D. +0.1 -0.1 +0.4 -0.3
carbon source Sebacic (C) N.D. +0.3 +0.3 -0.1 -0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.4 +1.3 -0.6 +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.2 +0.6 -0.1 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.0 +0.1 +0.6 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 +0.4 +0.5 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.3 +0.5 +0.5 +0.1
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