Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01808 and H281DRAFT_01809 are separated by 72 nucleotidesH281DRAFT_01809 and H281DRAFT_01810 are separated by 6 nucleotidesH281DRAFT_01810 and H281DRAFT_01811 are separated by 103 nucleotidesH281DRAFT_01811 and H281DRAFT_01812 are separated by 100 nucleotides H281DRAFT_01808: H281DRAFT_01808 - Sugar phosphate permease, at 709,604 to 710,980 _01808 H281DRAFT_01809: H281DRAFT_01809 - 3-dehydroquinate dehydratase, at 711,053 to 711,508 _01809 H281DRAFT_01810: H281DRAFT_01810 - transcriptional regulator, LysR family, at 711,515 to 712,483 _01810 H281DRAFT_01811: H281DRAFT_01811 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 712,587 to 713,363 _01811 H281DRAFT_01812: H281DRAFT_01812 - Short-chain dehydrogenase, at 713,464 to 714,213 _01812
Group Condition H281DRAFT_01808 H281DRAFT_01809 H281DRAFT_01810 H281DRAFT_01811 H281DRAFT_01812
carbon source Sebacic (C) -0.0 +0.3 -0.2 -0.9 -1.2
ecofab LB in EcoFAB_3.5mL -0.0 -0.4 -0.0 -1.4 -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.0 -1.7 +0.3 -0.7 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.2 -1.0 -0.4 +0.5 -0.6
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.0 -1.1 -0.0 -0.6 -0.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 +0.3 -0.0 -1.1 -0.6
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.1 -1.0 -0.1 -0.9 +0.4
carbon source L-Glutamic (C) +0.1 -0.1 -0.3 -0.8 -0.3
carbon source propionate (C) +0.2 -0.4 +0.0 -0.7 -0.7
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 -1.3 -0.1 -0.2 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.1 -0.5 -0.6 -0.5 +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.6 -0.2 -0.5 +0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 -0.8 -0.3 -0.4 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.2 -0.5 +0.0 -0.6 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.0 -0.6 +0.0 -1.0 +0.6
carbon source adipate (C) -0.2 +0.6 -0.1 -0.9 +0.2
carbon source Gallic Acid (C) +0.2 +0.6 -0.3 -0.4 -0.4
carbon source acetate (C) +0.0 -0.4 -0.5 +0.7 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.7 +0.1 -0.8 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.8 +0.2 -0.6 -0.3
carbon source 3-Hydroxypropionate (C) -0.1 +0.3 -0.2 +0.5 -0.4
carbon source Valeric (C) -0.3 -0.2 +0.1 +0.9 -0.5
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 -0.5 -0.2 +0.2 +0.7
control NoPhageControl -0.1 -0.1 +0.2 +0.8 -0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 +0.7 +0.0 -0.7 +0.4
phage Bu1_100 +0.1 +1.3 -0.1 +0.1 -0.8
carbon source butyrate (C) -0.1 -0.2 +0.4 +0.7 +0.3
carbon source D-Glucose (C) -0.2 +0.8 +0.1 +0.1 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.1 +0.8 +0.6 +0.2 +0.3
phage Bu1_100 -0.5 +0.2 +0.8 -0.1 +1.6
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