Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01801 and H281DRAFT_01802 are separated by 30 nucleotidesH281DRAFT_01802 and H281DRAFT_01803 are separated by 144 nucleotidesH281DRAFT_01803 and H281DRAFT_01804 are separated by 165 nucleotidesH281DRAFT_01804 and H281DRAFT_01805 are separated by 122 nucleotides H281DRAFT_01801: H281DRAFT_01801 - Predicted arabinose efflux permease, MFS family, at 701,565 to 702,827 _01801 H281DRAFT_01802: H281DRAFT_01802 - Pimeloyl-ACP methyl ester carboxylesterase, at 702,858 to 703,739 _01802 H281DRAFT_01803: H281DRAFT_01803 - transcriptional regulator, HxlR family, at 703,884 to 704,339 _01803 H281DRAFT_01804: H281DRAFT_01804 - Predicted arabinose efflux permease, MFS family, at 704,505 to 705,749 _01804 H281DRAFT_01805: H281DRAFT_01805 - cardiolipin synthase, at 705,872 to 707,227 _01805
Group Condition H281DRAFT_01801 H281DRAFT_01802 H281DRAFT_01803 H281DRAFT_01804 H281DRAFT_01805
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.1 -1.1 -0.8 +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.3 -0.5 -0.3 -0.3
carbon source succinate (C) +0.1 -0.2 -0.7 -0.6 -0.3
carbon source Dodecandioic (C) -0.1 -0.7 +0.1 -0.8 +0.0
carbon source adipate (C) -0.6 -0.5 +0.0 -0.5 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.0 -0.5 -0.7 -0.1
carbon source Protocatechuic Acid (C) +0.2 -0.3 +0.0 -0.8 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 +0.2 -1.5 -0.1 +0.3
phage Bu1_10 -0.5 +0.4 -0.2 -0.4 -0.5
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 -0.1 -1.0 -0.5 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 +0.3 -1.1 -0.3 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.2 -0.8 -0.3 -0.0
carbon source Valeric (C) -0.3 -0.5 +0.1 -0.6 +0.2
carbon source Malonic (C) +0.2 -0.3 -0.3 -0.4 -0.3
carbon source p-Coumaric (C) +0.1 +0.2 -0.5 -0.3 -0.4
carbon source Suberic (C) +0.3 -0.4 -0.2 -0.5 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.3 -0.3 -0.3 -0.6 -0.0
carbon source 2'-Deoxyinosine 10 mM (C) +0.4 -0.3 -0.6 -0.3 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 -0.5 -0.6 +0.2 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) +0.3 -0.1 -0.8 -0.3 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 -0.1 -0.7 -0.4 -0.0
carbon source acetate (C) +0.1 -0.3 +0.3 -0.6 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 -0.2 -0.8 -0.1 +0.0
carbon source D-Glucose 20 mM (C) +0.6 -0.3 -0.1 -0.6 -0.0
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.2 -0.7 -0.4 +0.1
carbon source 3-Hydroxypropionate (C) -0.1 -0.2 +0.6 -0.5 +0.1
carbon source Phenylacetic (C) +0.1 +0.0 +0.5 -0.8 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.2 -1.0 -0.0 +0.8
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 -0.4 +1.5 -0.4 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 -0.2 +1.4 -0.5 +0.0
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