Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01780 and H281DRAFT_01781 are separated by 23 nucleotidesH281DRAFT_01781 and H281DRAFT_01782 are separated by 54 nucleotidesH281DRAFT_01782 and H281DRAFT_01783 are separated by 115 nucleotidesH281DRAFT_01783 and H281DRAFT_01784 are separated by 117 nucleotides H281DRAFT_01780: H281DRAFT_01780 - hypothetical protein, at 682,930 to 683,742 _01780 H281DRAFT_01781: H281DRAFT_01781 - hypothetical protein, at 683,766 to 684,332 _01781 H281DRAFT_01782: H281DRAFT_01782 - Predicted arabinose efflux permease, MFS family, at 684,387 to 685,697 _01782 H281DRAFT_01783: H281DRAFT_01783 - Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding, at 685,813 to 686,397 _01783 H281DRAFT_01784: H281DRAFT_01784 - Pimeloyl-ACP methyl ester carboxylesterase, at 686,515 to 687,387 _01784
Group Condition H281DRAFT_01780 H281DRAFT_01781 H281DRAFT_01782 H281DRAFT_01783 H281DRAFT_01784
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.1 -1.3 -0.1
carbon source adipate (C) N.D. N.D. -0.5 -0.3 -0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. -0.4 -0.3 -0.7
carbon source D-Glucose (C) N.D. N.D. -0.3 -0.2 -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.3 -1.1 -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. +0.1 -0.4 -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.1 -0.9 -0.3
carbon source propionate (C) N.D. N.D. -0.1 -0.5 -0.4
control NoPhageControl N.D. N.D. -0.2 -0.0 -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.2 -1.1 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.2 -1.1 +0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. +0.3 -0.7 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.1 -0.4 -0.4
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. -0.5 -0.4 +0.2
phage Bu1_100 N.D. N.D. -0.3 +0.4 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.2 -0.9 +0.0
carbon source Protocatechuic Acid (C) N.D. N.D. +0.1 -0.9 +0.1
carbon source Phenylacetic (C) N.D. N.D. +0.2 -0.5 -0.3
carbon source Azelaic (C) N.D. N.D. -0.5 -0.4 +0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. +0.5 -0.4 -0.6
carbon source Gallic Acid (C) N.D. N.D. -0.4 -0.1 +0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.1 +0.6 -0.4
carbon source D-Glucose 20 mM (C) N.D. N.D. +0.5 -0.3 +0.3
carbon source D-Glucose 20 mM (C) N.D. N.D. +0.3 -0.2 +0.5
phage Bu1_10 N.D. N.D. -0.2 +1.0 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. N.D. +0.7 -0.4 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. +0.5 -0.2 +0.5
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. N.D. +0.7 -0.2 +0.4
carbon source Hexanoic (C) N.D. N.D. +0.1 +0.4 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. +0.6 +0.2 +0.8
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