Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01758 and H281DRAFT_01759 are separated by 1 nucleotidesH281DRAFT_01759 and H281DRAFT_01760 are separated by 347 nucleotidesH281DRAFT_01760 and H281DRAFT_01761 are separated by 89 nucleotidesH281DRAFT_01761 and H281DRAFT_01762 are separated by 58 nucleotides H281DRAFT_01758: H281DRAFT_01758 - rsbT antagonist protein RsbS, at 654,198 to 654,581 _01758 H281DRAFT_01759: H281DRAFT_01759 - rsbT co-antagonist protein RsbR, at 654,583 to 655,452 _01759 H281DRAFT_01760: H281DRAFT_01760 - conserved domain-containing protein, at 655,800 to 656,276 _01760 H281DRAFT_01761: H281DRAFT_01761 - conserved domain-containing protein, at 656,366 to 657,238 _01761 H281DRAFT_01762: H281DRAFT_01762 - Cytochrome c, mono- and diheme variants, at 657,297 to 658,649 _01762
Group Condition H281DRAFT_01758 H281DRAFT_01759 H281DRAFT_01760 H281DRAFT_01761 H281DRAFT_01762
phage Bu1_10 -0.4 -1.0 N.D. -0.0 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 -0.3 N.D. -1.0 +0.0
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.4 N.D. -1.0 +0.1
carbon source Valeric (C) +0.3 -0.3 N.D. -1.0 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 -0.4 N.D. -0.6 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.0 +0.0 N.D. -0.8 -0.3
phage Bu1_100 -0.9 +0.1 N.D. -0.1 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 +0.1 N.D. -0.5 -0.3
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.1 N.D. -0.7 -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 +0.1 N.D. -0.9 +0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.2 -0.7 N.D. -0.4 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 +0.1 N.D. -0.7 -0.1
carbon source Phenylacetic (C) -0.1 +0.2 N.D. -0.4 -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.3 +0.4 N.D. -0.0 -0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 -0.1 N.D. -0.2 +0.2
carbon source L-Glutamic (C) +0.2 -0.5 N.D. +0.1 -0.1
carbon source succinate (C) +0.1 -0.4 N.D. -0.2 +0.3
carbon source Dodecandioic (C) -0.1 +0.5 N.D. -0.3 -0.2
carbon source 4-Methyl-2-oxopentanoic (C) +0.0 +0.1 N.D. +0.3 -0.5
carbon source D-Glucose (C) +0.2 +0.3 N.D. -0.2 -0.3
carbon source D-Galactose (C) +0.0 +0.2 N.D. +0.3 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.4 N.D. +0.7 +0.1
carbon source adipate (C) +0.3 +0.1 N.D. +0.6 -0.5
carbon source 2-furoic (C) +0.1 -0.3 N.D. +0.5 +0.1
carbon source Hexanoic (C) +0.3 +0.2 N.D. -0.5 +0.5
phage Bu1_100 -0.6 +0.4 N.D. +0.7 +0.5
carbon source adipate (C) +0.0 +0.3 N.D. +0.6 +0.1
carbon source butyrate (C) +0.3 -0.0 N.D. +0.6 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.2 +0.3 N.D. +0.4 +0.1
lb LB +0.2 +0.5 N.D. +0.5 -0.0
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